RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ZNF317Q96PQ6 595 aaPredicted RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 TIPINQ9BVW5 301 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 C12orf65Q9H3J6 166 aaKnown RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 AS3MTQ9HBK9 375 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 KLHL14Q9P2G3 628 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 PLA2G6O60733 806 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 VNN1O95497 513 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 EZRP15311 586 aaKnown RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 GARTP22102 1010 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 PSMA2P25787 234 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 KCNJ2P63252 427 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 BASP1P80723 227 aaKnown RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 DALRD3Q5D0E6 543 aaKnown RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 DCAF15Q66K64 600 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 CCDC91Q7Z6B0 441 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 CCT6BQ92526 530 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 PRCCQ92733 491 aaPredicted RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 GPRASP2Q96D09 838 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 TRIM11Q96F44 468 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 SGSM3Q96HU1 749 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 WHRNQ9P202 907 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 USP15Q9Y4E8 981 aaPredicted RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 THSD7AQ9UPZ6 1657 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 F5H423 210 aaPredicted RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 PGK2P07205 417 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 SUPT20HL2P0C7V6 817 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 HADHBP55084 474 aaKnown RBP13.68□□□□□ -0.22
USP11-204ENST00000377107 LY6KQ17RY6 165 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 SUPT20HL1Q3ZLR7 823 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 HHATQ5VTY9 493 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 SCYL2Q6P3W7 929 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 ENOSF1Q7L5Y1 443 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 CCDC33Q8N5R6 958 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 PARVAQ9NVD7 372 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 TJP2Q9UDY2 1190 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 COQ4Q9Y3A0 265 aa13.68□□□□□ -0.22
USP11-204ENST00000377107 STAM2O75886 525 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 OATP04181 439 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 NOMO3P69849 1222 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 SPATA21Q7Z572 469 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 YTHDF3Q7Z739 585 aaKnown RBP13.67□□□□□ -0.22
USP11-204ENST00000377107 HAPLN2Q9GZV7 340 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 RNF19AQ9NV58 838 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 PECAM1P16284 738 aaPredicted RBP13.67□□□□□ -0.22
USP11-204ENST00000377107 PTPRAP18433 802 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 STAT5BP51692 787 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 EMC10Q5UCC4 262 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 ZC3H18Q86VM9 953 aaKnown RBP13.67□□□□□ -0.22
USP11-204ENST00000377107 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 RSAD2Q8WXG1 361 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 SLCO1B3Q9NPD5 702 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 C10orf71Q711Q0 1435 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 ATP2A1O14983 1001 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 SLC1A1P43005 524 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 ZNF699Q32M78 642 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 ARHGEF18Q6ZSZ5 1173 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 TEPSINQ96N21 525 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
USP11-204ENST00000377107 SIPA1L1O43166 1804 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 IGF2BP3O00425 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP11-204ENST00000377107 C4BPAP04003 597 aaKnown RBP13.66□□□□□ -0.22
USP11-204ENST00000377107 GAD2Q05329 585 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 PSMD6Q15008 389 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 RFX6Q8HWS3 928 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 KCNV2Q8TDN2 545 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 CDHR1Q96JP9 859 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 ST6GALNAC4Q9H4F1 302 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 POLIQ9UNA4 740 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 AGAP1Q9UPQ3 857 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 SCINQ9Y6U3 715 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 CDH16O75309 829 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 TJP3O95049 919 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 FDX1P10109 184 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 MAN1A1P33908 653 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 ERFP50548 548 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 PKN2Q16513 984 aaKnown RBP13.66□□□□□ -0.22
USP11-204ENST00000377107 FKBP1CQ5VVH2 108 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
USP11-204ENST00000377107 SCYL3Q8IZE3 742 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 TMEM35BQ8NCS4 154 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 SERPINB12Q96P63 405 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 CISHQ9NSE2 258 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 NRBP2Q9NSY0 501 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 ARHGAP28Q9P2N2 729 aa13.66□□□□□ -0.22
USP11-204ENST00000377107 A8MUI8 341 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 SNX3O60493 162 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 EDN1P05305 212 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 SSTR1P30872 391 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 TCF7P36402 384 aaPredicted RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 SNRPFP62306 86 aaKnown RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 MYO1EQ12965 1108 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 PTK6Q13882 451 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 CYP1B1Q16678 543 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 VSTM1Q6UX27 236 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms