RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 DSC1Q08554 894 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 CLUL1Q15846 466 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 PTPROQ16827 1216 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 TMEM132AQ24JP5 1023 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 HAUS6Q7Z4H7 955 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 SFR1Q86XK3 245 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 MYCT1Q8N699 235 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 IGSF21Q96ID5 467 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 B3GALT6Q96L58 329 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 MMS19Q96T76 1030 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 COL25A1Q9BXS0 654 aaPredicted RBP13.32□□□□□ -0.28
VRK3-202ENST00000377011 LACRTQ9GZZ8 138 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 SPG21Q9NZD8 308 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 SNX12Q9UMY4 172 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 TNFSF13BQ9Y275 285 aa13.32□□□□□ -0.28
VRK3-202ENST00000377011 ANKRD63C9JTQ0 380 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 IDEP14735 1019 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 KCNA5P22460 613 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 ACTN2P35609 894 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 NRIP1P48552 1158 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 KLK7P49862 253 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 KIF11P52732 1056 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 ZSCAN26Q16670 478 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 CTC1Q2NKJ3 1217 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
VRK3-202ENST00000377011 KCTD17Q8N5Z5 321 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 ZSWIM2Q8NEG5 633 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.31□□□□□ -0.28
VRK3-202ENST00000377011 ZMAT2Q96NC0 199 aaKnown RBP13.31□□□□□ -0.28
VRK3-202ENST00000377011 TCF25Q9BQ70 676 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 MRPL9Q9BYD2 267 aaKnown RBP13.31□□□□□ -0.28
VRK3-202ENST00000377011 LMAN2LQ9H0V9 348 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 UBE2ZQ9H832 354 aaPredicted RBP13.31□□□□□ -0.28
VRK3-202ENST00000377011 GOLGA2P5Q9HBQ8 144 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 LUC7LQ9NQ29 371 aaKnown RBP13.31□□□□□ -0.28
VRK3-202ENST00000377011 TLR9Q9NR96 1032 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 KCND2Q9NZV8 630 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 RNF14Q9UBS8 474 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 CDH22Q9UJ99 828 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 GIT1Q9Y2X7 761 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 PCDHA13Q9Y5I0 950 aa13.31□□□□□ -0.28
VRK3-202ENST00000377011 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 K7ENM7 598 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 CLSTN1O94985 981 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 FAM13AO94988 1023 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 EFEMP2O95967 443 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 KRT18P05783 430 aaKnown RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 BMP1P13497 986 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 TNFSF9P41273 254 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 SOX4Q06945 474 aaPredicted RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 ZNF568Q3ZCX4 644 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 TIGD5Q53EQ6 642 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 PDXDC1Q6P996 788 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 NEK11Q8NG66 645 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 MICAL1Q8TDZ2 1067 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 HASPINQ8TF76 798 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 BAP1Q92560 729 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 HLA-CQ95604 372 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ASB2Q96Q27 587 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 TIPINQ9BVW5 301 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 MRPL4Q9BYD3 311 aaKnown RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 C17orf75Q9HAS0 396 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 PARVGQ9HBI0 331 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 AAASQ9NRG9 546 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 CLDND1Q9NY35 253 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 CEP72Q9P209 647 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ARHGAP20Q9P2F6 1191 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ANKFY1Q9P2R3 1169 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 CITO14578 2027 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ENC1O14682 589 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ZNF263O14978 683 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 MYBP10242 640 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 OR1G1P47890 313 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ALDH7A1P49419 539 aaKnown RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 ASTE1Q2TB18 679 aaPredicted RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 CD300LGQ6UXG3 332 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 LEKR1Q6ZMV7 388 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 CCDC65Q8IXS2 484 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 VPS52Q8N1B4 723 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 URGCPQ8TCY9 931 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 ZBP1Q9H171 429 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 DEF6Q9H4E7 631 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
VRK3-202ENST00000377011 TBX20Q9UMR3 447 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 HYOU1Q9Y4L1 999 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 VWA8A3KMH1 1905 aa13.3□□□□□ -0.28
VRK3-202ENST00000377011 C2orf71A6NGG8 1288 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 AKR1B10O60218 316 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 FAM189A1O60320 539 aa13.29□□□□□ -0.28
VRK3-202ENST00000377011 PPP1R37O75864 691 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms