RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 TLR3O15455 904 aaKnown RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 PHKA2P46019 1235 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 RAP1GAPP47736 663 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 RPL7AP62424 266 aaKnown RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 SNX1Q13596 522 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 MAP1SQ66K74 1059 aaPredicted RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 ANKS1BQ7Z6G8 1248 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 FEZF2Q8TBJ5 459 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 RUNDC3BQ96NL0 473 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 PLVAPQ9BX97 442 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 RPF1Q9H9Y2 349 aaKnown RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 PRMT7Q9NVM4 692 aaPredicted RBP23.05■■□□□ 1.28
RNF39-202ENST00000376751 USTQ9Y2C2 406 aa23.05■■□□□ 1.28
RNF39-202ENST00000376751 CCL15-CCL14A0A0B4J2E2 113 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 PSTPIP1O43586 416 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 SNAI1O95863 264 aaPredicted RBP23.04■■□□□ 1.28
RNF39-202ENST00000376751 VTNP04004 478 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 MYZAPP0CAP1 466 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 NR1D1P20393 614 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 ZNF252P-AS1Q0IIN9 211 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 PDCLQ13371 301 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 CCL15Q16663 113 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 UBAP2Q5T6F2 1119 aaKnown RBP23.04■■□□□ 1.28
RNF39-202ENST00000376751 WDTC1Q8N5D0 677 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 C16orf70Q9BSU1 422 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 CENPHQ9H3R5 247 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 PDZD7Q9H5P4 517 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 PARVAQ9NVD7 372 aa23.04■■□□□ 1.28
RNF39-202ENST00000376751 PASKQ96RG2 1323 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 LACTBL1A8MY62 500 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 LSM8O95777 96 aaKnown RBP23.03■■□□□ 1.28
RNF39-202ENST00000376751 CETPP11597 493 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 TCF4P15884 667 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 GJC1P36383 396 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 FAM187BQ17R55 369 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 PPP1R2P3Q6NXS1 205 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 C1orf127Q8N9H9 656 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 SLCO2A1Q92959 643 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 CPB2Q96IY4 423 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 NXF1Q9UBU9 619 aaKnown RBP23.03■■□□□ 1.28
RNF39-202ENST00000376751 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.03■■□□□ 1.28
RNF39-202ENST00000376751 GOLGA6L10A6NI86 522 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 IL18RAPO95256 599 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 ECEL1O95672 775 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 STAG3L1P0CL83 205 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 EMC10Q5UCC4 262 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 IFNLR1Q8IU57 520 aaPredicted RBP23.03■■□□□ 1.28
RNF39-202ENST00000376751 RHOT1Q8IXI2 618 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 KATNAL2Q8IYT4 538 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.03■■□□□ 1.28
RNF39-202ENST00000376751 EMID1Q96A84 441 aaPredicted RBP23.03■■□□□ 1.28
RNF39-202ENST00000376751 HEMGNQ9BXL5 484 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 DCLK3Q9C098 648 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 SDCBP2Q9H190 292 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 AKT3Q9Y243 479 aa23.03■■□□□ 1.28
RNF39-202ENST00000376751 TMEM191CA6NGB0 347 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 EIF3HO15372 352 aaKnown RBP eCLIP23.02■■□□□ 1.28
RNF39-202ENST00000376751 RALAP11233 206 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 MAN1A1P33908 653 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 PMS2P54278 862 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 KRT17Q04695 432 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 KLF1Q13351 362 aaPredicted RBP23.02■■□□□ 1.28
RNF39-202ENST00000376751 SPDYCQ5MJ68 293 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 JADE1Q6IE81 842 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 DENND1BQ6P3S1 775 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 ART4Q93070 314 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 MORF4L1Q9UBU8 362 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 SLC45A1Q9Y2W3 748 aa23.02■■□□□ 1.28
RNF39-202ENST00000376751 CALB1P05937 261 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 KRT19P08727 400 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 CDH5P33151 784 aaPredicted RBP23.01■■□□□ 1.27
RNF39-202ENST00000376751 OGDHQ02218 1023 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 POU5F1BQ06416 359 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 CCDC50Q8IVM0 306 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 TMEM35BQ8NCS4 154 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 CXorf38Q8TB03 319 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 RNF25Q96BH1 459 aaPredicted RBP23.01■■□□□ 1.27
RNF39-202ENST00000376751 KLHL11Q9NVR0 708 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 PCDHGC3Q9UN70 934 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 CLEC11AQ9Y240 323 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 IQCA1LA6NCM1 817 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 TP73O15350 636 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 MAGEB2O15479 319 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 ERLIN2O94905 339 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 SHBGP04278 402 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 MCF2P10911 925 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 GBP1P32455 592 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 CYP4A22Q5TCH4 519 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 MCEEQ96PE7 176 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 BCO2Q9BYV7 579 aa23.01■■□□□ 1.27
RNF39-202ENST00000376751 IVLP07476 585 aa23■■□□□ 1.27
RNF39-202ENST00000376751 ARF4P18085 180 aaPredicted RBP23■■□□□ 1.27
RNF39-202ENST00000376751 SSR1P43307 286 aaKnown RBP23■■□□□ 1.27
RNF39-202ENST00000376751 GTF2A2P52657 109 aa23■■□□□ 1.27
RNF39-202ENST00000376751 CDH8P55286 799 aa23■■□□□ 1.27
RNF39-202ENST00000376751 ORC1Q13415 861 aa23■■□□□ 1.27
RNF39-202ENST00000376751 PPP1R7Q15435 360 aa23■■□□□ 1.27
RNF39-202ENST00000376751 PPP1R15BQ5SWA1 713 aa23■■□□□ 1.27
RNF39-202ENST00000376751 DNAJC24Q6P3W2 148 aa23■■□□□ 1.27
RNF39-202ENST00000376751 MTHFD1LQ6UB35 978 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms