RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PPP1R15BQ5SWA1 713 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 RGS9BPQ6ZS82 235 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF365Q70YC5 407 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ASRGL1Q7L266 308 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 CCDC63Q8NA47 563 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 DENND1AQ8TEH3 1009 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 SLITRK1Q96PX8 696 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 MYCBPQ99417 103 aaPredicted RBP11.31□□□□□ -0.6
ABCF1-202ENST00000376545 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
ABCF1-202ENST00000376545 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 UBN1Q9NPG3 1134 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 TLR3O15455 904 aaKnown RBP11.31□□□□□ -0.6
ABCF1-202ENST00000376545 EDN1P05305 212 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ACOT2P49753 483 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 GRM1Q13255 1194 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 MTFR1Q15390 333 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 MIS18BP1Q6P0N0 1132 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 TMEM270Q6UE05 265 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 SPATA21Q7Z572 469 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ALLCQ8N6M5 410 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
ABCF1-202ENST00000376545 ASAP3Q8TDY4 903 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 GRAMD1AQ96CP6 724 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 CYP39A1Q9NYL5 469 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 RBAKQ9NYW8 714 aaPredicted RBP11.31□□□□□ -0.6
ABCF1-202ENST00000376545 PCDHB4Q9Y5E5 795 aa11.31□□□□□ -0.6
ABCF1-202ENST00000376545 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 FAM189A1O60320 539 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 TAC1P20366 129 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 CDH5P33151 784 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 SP2Q02086 613 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 STRN3Q13033 797 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 NR1H3Q13133 447 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 OASLQ15646 514 aaKnown RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 NUGGCQ68CJ6 796 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 PPP1R21Q6ZMI0 780 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 NIPA2Q8N8Q9 360 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF526Q8TF50 670 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 DYDC1Q8WWB3 177 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF606Q8WXB4 792 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 RBM41Q96IZ5 413 aaKnown RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 ZBTB45Q96K62 511 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 CCDC77Q9BR77 488 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 NOD2Q9HC29 1040 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 ARHGEF3Q9NR81 526 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 CTDP1Q9Y5B0 961 aaPredicted RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 ASMTLO95671 621 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 CCNB1P14635 433 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 SKIV2L2P42285 1042 aaKnown RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 MGAT5Q09328 741 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 P3H1Q32P28 736 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 TRABD2AQ86V40 505 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 FITM2Q8N6M3 262 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 TTC25Q96NG3 672 aa11.3□□□□□ -0.6
ABCF1-202ENST00000376545 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 RBM15Q96T37 977 aaKnown RBP eCLIP11.3□□□□□ -0.62e-8■■■■□ 26.2
ABCF1-202ENST00000376545 DNAJC17Q9NVM6 304 aaKnown RBP11.3□□□□□ -0.6
ABCF1-202ENST00000376545 A0A0G2JMZ2 1700 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 LRRC37A2A6NM11 1700 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 LSM8O95777 96 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 EGFRP00533 1210 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 CD58P19256 250 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 WDR4P57081 412 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 RPL7AP62424 266 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 NOP14P78316 857 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 TMEM132BQ14DG7 1078 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 FAM133BQ5BKY9 247 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 SNRNP48Q6IEG0 339 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ANKRD35Q8N283 1001 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 GLIS1Q8NBF1 620 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 OR5B17Q8NGF7 314 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 MGARPQ8TDB4 240 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 CFAP57Q96MR6 1250 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 PHACTR1Q9C0D0 580 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 DNPEPQ9ULA0 475 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 SCAF8Q9UPN6 1271 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 CD2APQ9Y5K6 639 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ANK1P16157 1881 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 OATP04181 439 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 TCF4P15884 667 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 FOXN2P32314 431 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 RDXP35241 583 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 AP3M2P53677 418 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 TGFB2P61812 414 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 MORF4L2Q15014 288 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 TARBP2Q15633 366 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 MTERF2Q49AM1 385 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 CIAPIN1Q6FI81 312 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 PASD1Q8IV76 773 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 NKD2Q969F2 451 aaPredicted RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 FHDC1Q9C0D6 1143 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms