RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 RAD23BP54727 409 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 LPIN1Q14693 890 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 CLUL1Q15846 466 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 SPATA18Q8TC71 538 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 OSBPL9Q96SU4 736 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 DNAI2Q9GZS0 605 aa11.86□□□□□ -0.51
PDPN-202ENST00000376057 KBTBD13C9JR72 458 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 TLR3O15455 904 aaKnown RBP11.85□□□□□ -0.51
PDPN-202ENST00000376057 BUB1O43683 1085 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 KRT19P08727 400 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 PTP4A2Q12974 167 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 NT5DC3Q86UY8 548 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 PPP1R13LQ8WUF5 828 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 SDCBP2Q9H190 292 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 WBP1LQ9NX94 342 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 TTC7AQ9ULT0 858 aaPredicted RBP11.85□□□□□ -0.51
PDPN-202ENST00000376057 A0A0U1RQF3 1178 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 VDRP11473 427 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 COL6A1P12109 1028 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
PDPN-202ENST00000376057 TNNC1P63316 161 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 TAF3Q5VWG9 929 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 TWF2Q6IBS0 349 aaKnown RBP11.85□□□□□ -0.51
PDPN-202ENST00000376057 CREG2Q8IUH2 290 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 RABGGTAQ92696 567 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 ARHGEF26Q96DR7 871 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 CARD6Q9BX69 1037 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 PADI3Q9ULW8 664 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
PDPN-202ENST00000376057 TRIP11Q15643 1979 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 MIF4GDA9UHW6 222 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 THAP12O43422 761 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 TUBBP07437 444 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 ITGA4P13612 1032 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 MMP8P22894 467 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 RPL9P32969 192 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 NSFP46459 744 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 TAP1Q03518 808 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 PAK2Q13177 524 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 CNGA2Q16280 664 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 LIN9Q5TKA1 542 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 C1orf53Q5VUE5 145 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 PLEKHA7Q6IQ23 1121 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 SLC4A11Q8NBS3 891 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 TMEM35BQ8NCS4 154 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 ANKRD7Q92527 254 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 PGBD4Q96DM1 585 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 ACP6Q9NPH0 428 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 STARD7Q9NQZ5 370 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 SEPT11Q9NVA2 429 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 POLIQ9UNA4 740 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 COG5Q9UP83 839 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 ENC1O14682 589 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 KIF4AO95239 1232 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 CALB1P05937 261 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 CKBP12277 381 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 NOP2P46087 812 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 FAM189BP81408 668 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 SV2CQ496J9 727 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 TOP6BLQ8N6T0 577 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 RSPH1Q8WYR4 309 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 RUBCNQ92622 972 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 GOLGA1Q92805 767 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 AGO3Q9H9G7 860 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 MRPL47Q9HD33 250 aaKnown RBP11.84□□□□□ -0.51
PDPN-202ENST00000376057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDPN-202ENST00000376057 RGS18Q9NS28 235 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 SCINQ9Y6U3 715 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 MYH10P35580 1976 aa11.84□□□□□ -0.51
PDPN-202ENST00000376057 PTGESO14684 152 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 EOMESO95936 686 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 WEE2P0C1S8 567 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 RPS6KA1Q15418 735 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 RASGEF1CQ8N431 466 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 CYFIP2Q96F07 1278 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 CRISPLD2Q9H0B8 497 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 RNF39Q9H2S5 420 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 TRMT13Q9NUP7 481 aaKnown RBP11.83□□□□□ -0.52
PDPN-202ENST00000376057 TUBGCP4Q9UGJ1 667 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 AMFRQ9UKV5 643 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 TCRBV5S1A1TA0A578 114 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 BUB1BO60566 1050 aaPredicted RBP11.83□□□□□ -0.52
PDPN-202ENST00000376057 PARNO95453 639 aaKnown RBP11.83□□□□□ -0.52
PDPN-202ENST00000376057 CTAGE8P0CG41 777 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 CTNNA2P26232 953 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 MAN1A1P33908 653 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 SLC1A1P43005 524 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 GABRB2P47870 512 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 ZNF618Q5T7W0 954 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 CTAGE6Q86UF2 777 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 CTAGE4Q8IX94 777 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 GPR161Q8N6U8 529 aaKnown RBP11.83□□□□□ -0.52
PDPN-202ENST00000376057 GSTCDQ8NEC7 633 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 ACTRT1Q8TDG2 376 aa11.83□□□□□ -0.52
PDPN-202ENST00000376057 ELMO3Q96BJ8 720 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms