RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CENPCQ03188 943 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 MOGSQ13724 837 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 SLC1A5Q15758 541 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 CCNG2Q16589 344 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 LDHDQ86WU2 507 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 TMEM174Q8WUU8 243 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 SLC7A6OSQ96CW6 309 aaPredicted RBP14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 TBC1D10AQ9BXI6 508 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 EHMT1Q9H9B1 1298 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 TBX20Q9UMR3 447 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 ACTL7BQ9Y614 415 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 USH1CQ9Y6N9 552 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 SSC5DA1L4H1 1573 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 A0A1W2PPM1 405 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 MAPK13O15264 365 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 FGFR1P11362 822 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 QARSP47897 775 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 CCNG1P51959 295 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 YARSP54577 528 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 RAD23BP54727 409 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 BLMHQ13867 455 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 TTC8Q8TAM2 541 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 AGBL1Q96MI9 1066 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 C11orf70Q9BRQ4 267 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 RANBP17Q9H2T7 1088 aaKnown RBP14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 RNPEPL1Q9HAU8 725 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 UMODL1Q5DID0 1318 aa14.94□□□□□ -0.02
CLCNKA-202ENST00000375692 PROSCO94903 275 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 MTMR2Q13614 643 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 PARP6Q2NL67 630 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 EAPPQ56P03 285 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 MOB2Q70IA6 237 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 ZCCHC9Q8N567 271 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 KLRG1Q96E93 195 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 GLTPD2A6NH11 291 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 MAGEB2O15479 319 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 ENTPD5O75356 428 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 WFS1O76024 890 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 TCF4P15884 667 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 CALB2P22676 271 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 EPHX2P34913 555 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 SLC1A1P43005 524 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 GRIK3Q13003 919 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 SPARCL1Q14515 664 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 CDCA2Q69YH5 1023 aaPredicted RBP14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 SLC39A4Q6P5W5 647 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 NUDCD1Q96RS6 583 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 DNPEPQ9ULA0 475 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 NUMBLQ9Y6R0 609 aa14.93□□□□□ -0.02
CLCNKA-202ENST00000375692 DENND3A2RUS2 1198 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 EDF1O60869 148 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 BANF1O75531 89 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 USP2O75604 605 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 TPBGLP0DKB5 382 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 PECAM1P16284 738 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 CA4P22748 312 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 DSG3P32926 999 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 NSFP46459 744 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 NPTX2P47972 431 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 NCKAP1LP55160 1127 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 XKR9Q5GH70 373 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 DCAF15Q66K64 600 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 SPOPLQ6IQ16 392 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 SULF1Q8IWU6 871 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 AGGF1Q8N302 714 aaeCLIP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 TMEM161BQ8NDZ6 487 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 VPS37BQ9H9H4 285 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 AVENQ9NQS1 362 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 ZNF112Q9UJU3 913 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 WDR91A4D1P6 747 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 ENO4A6NNW6 628 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 LINGO3P0C6S8 592 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 PTPRAP18433 802 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 TAF1BQ53T94 588 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 ZFYVE27Q5T4F4 411 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 RELL1Q8IUW5 271 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 RHOT1Q8IXI2 618 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 BBOF1Q8ND07 529 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 LRRC8CQ8TDW0 803 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 STK32AQ8WU08 396 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 ZNF516Q92618 1163 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 CFAP57Q96MR6 1250 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 OSBPL1AQ9BXW6 950 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 YIPF3Q9GZM5 350 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 C12orf65Q9H3J6 166 aaKnown RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 CYP39A1Q9NYL5 469 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 CORO1CQ9ULV4 474 aaPredicted RBP14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 ZNF148Q9UQR1 794 aa14.92□□□□□ -0.02
CLCNKA-202ENST00000375692 EME2A4GXA9 379 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 NFIBO00712 420 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 PPP1R12AO14974 1030 aaPredicted RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 NOP14P78316 857 aaKnown RBP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 CYP24A1Q07973 514 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 TRAF1Q13077 416 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 PDK4Q16654 411 aa14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.91□□□□□ -0.02
CLCNKA-202ENST00000375692 C10orf82Q8WW14 230 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms