RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 MAGEB18Q96M61 343 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 PNMA5Q96PV4 448 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 NEURL4Q96JN8 1562 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 LOC100653049A0A140TA62 436 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 E2F6O75461 281 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 KRT34O76011 436 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 SREBF1P36956 1147 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 PRKCEQ02156 737 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 CYTH1Q15438 398 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
PTCH1-203ENST00000375274 ZBTB18Q99592 522 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 TBX20Q9UMR3 447 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 VWDEQ8N2E2 1590 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 TRIM49D1C9J1S8 452 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 ENO3P13929 434 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-203ENST00000375274 HMGCS2P54868 508 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 EMC2Q15006 297 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 ZNF720Q7Z2F6 126 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 CMTM5Q96DZ9 223 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 IL17RBQ9NRM6 502 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 HEY2Q9UBP5 337 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 GRID1Q9ULK0 1009 aa12.1□□□□□ -0.47
PTCH1-203ENST00000375274 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
PTCH1-203ENST00000375274 NEMP1O14524 444 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 EXTL3O43909 919 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 RRM1P23921 792 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 PRAMEP78395 509 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 TTLL4Q14679 1199 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 GRAMD4Q6IC98 578 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SPATA33Q96N06 139 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 FAM111AQ96PZ2 611 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 PXDNQ92626 1479 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 MEGF6O75095 1541 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 PSTPIP1O43586 416 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 DNAJC6O75061 913 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 GRAP2O75791 330 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 OCA2Q04671 838 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 STILQ15468 1287 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 DALRD3Q5D0E6 543 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 MSL3Q8N5Y2 521 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 FAM71DQ8N9W8 422 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SIK2Q9H0K1 926 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 BLOC1S4Q9NUP1 217 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 CES2O00748 559 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 ADCY3O60266 1144 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 ARPP19P56211 112 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 MXD4Q14582 209 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 NBPF20Q3BBV1 942 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 ZC3H15Q8WU90 426 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 PPP1R36Q96LQ0 422 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 NUDT12Q9BQG2 462 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 C17orf75Q9HAS0 396 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 GDF3Q9NR23 364 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 CNOT7Q9UIV1 285 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 ITSN1Q15811 1721 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 hCG_2014768A0A024R1R8 64 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 MAFGO15525 162 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SYF2O95926 243 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 STIP1P31948 543 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 MTMR2Q13614 643 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 COG2Q14746 738 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 LRRC8EQ6NSJ5 796 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 C1orf131Q8NDD1 294 aaKnown RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 ZNF507Q8TCN5 953 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 SLC35C1Q96A29 364 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 FRMD8Q9BZ67 464 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-203ENST00000375274 UNC45AQ9H3U1 944 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 GPRC5CQ9NQ84 441 aa12.09□□□□□ -0.47
PTCH1-203ENST00000375274 LCP1P13796 627 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 PSMC6P62333 389 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 RCN1Q15293 331 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 DAB2IPQ5VWQ8 1189 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 WDR59Q6PJI9 974 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 PRPF39Q86UA1 669 aaKnown RBP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 NCLNQ969V3 563 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 ACSF2Q96CM8 615 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 AGBL1Q96MI9 1066 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 PCDHGC5Q9Y5F6 944 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 GHRP10912 638 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 ACADSP16219 412 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 CHI3L2Q15782 390 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 MROH9Q5TGP6 573 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 TTC39BQ5VTQ0 682 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-203ENST00000375274 C16orf87Q6PH81 154 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 CDC26Q8NHZ8 85 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 SEPT1Q8WYJ6 367 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 TNIP3Q96KP6 325 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 SIK3Q9Y2K2 1263 aa12.08□□□□□ -0.48
PTCH1-203ENST00000375274 SNX5Q9Y5X3 404 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms