RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 NFKBIZQ9BYH8 718 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 HSPBP1Q9NZL4 362 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 IGSF9Q9P2J2 1179 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 STK39Q9UEW8 545 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 COL4A3Q01955 1670 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 OTOGLQ3ZCN5 2332 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 WDR87Q6ZQQ6 2873 aa11.83□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 NCOR2Q9Y618 2525 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 A0A1W2PQC6 194 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 HNRNPDLO14979 420 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KIAA0391O15091 583 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MAPK13O15264 365 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ALDH2P05091 517 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SPATA31D3P0C874 917 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ADSSP30520 456 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 HOXA11P31270 313 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MAPK6Q16659 721 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SPATA31D4Q6ZUB0 917 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 IFNLR1Q8IU57 520 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 COLGALT2Q8IYK4 626 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SMG8Q8ND04 991 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ST13P5Q8NFI4 369 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 POMGNT1Q8WZA1 660 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SMG7Q92540 1137 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ZNF707Q96C28 371 aaPredicted RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 BORCS6Q96GS4 357 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GAD1Q99259 594 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CBWD1Q9BRT8 395 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 APOL6Q9BWW8 343 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CCDC113Q9H0I3 377 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 FZD8Q9H461 694 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TBC1D17Q9HA65 648 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 WDR6Q9NNW5 1121 aaKnown RBP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 HES2Q9Y543 173 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 STYXL1Q9Y6J8 313 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 R4GN57 208 aa11.82□□□□□ -0.52
HLA-DQA1-202ENST00000374949 FANCMQ8IYD8 2048 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DOCK6Q96HP0 2047 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TISP43B9A030 160 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ACKR2O00590 384 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TSPAN1O60635 241 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ERLIN2O94905 339 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 LDHAP00338 332 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PRKCBP05771 671 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ITGA4P13612 1032 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KRT13P13646 458 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SCNN1GP51170 649 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KCNH2Q12809 1159 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TBX2Q13207 712 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SLC39A4Q6P5W5 647 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ZPBP2Q6X784 338 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GET4Q7L5D6 327 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ERMP1Q7Z2K6 904 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SRGAP1Q7Z6B7 1085 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GLYCTKQ8IVS8 523 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RNF168Q8IYW5 571 aaPredicted RBP11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SLC44A3Q8N4M1 653 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RDH13Q8NBN7 331 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GPR152Q8TDT2 470 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 CPB2Q96IY4 423 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ZFP42Q96MM3 310 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ERGIC2Q96RQ1 377 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TARS2Q9BW92 718 aaKnown RBP11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KIAA1586Q9HCI6 787 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KANSL3Q9P2N6 904 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 EPS15L1Q9UBC2 864 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 WNT16Q9UBV4 365 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 IPPQ9Y573 584 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MIA3Q5JRA6 1907 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ITIH6Q6UXX5 1313 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GPR179Q6PRD1 2367 aa11.81□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ARL5CA6NH57 179 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 INO80B-WBP1J3KQ70 363 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 EFEMP2O95967 443 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 AFPP02771 609 aaKnown RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DCNP07585 359 aaKnown RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TPM1P09493 284 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 SRFP11831 508 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MATR3P43243 847 aaKnown RBP eCLIP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MCCD1P59942 119 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 MBTD1Q05BQ5 628 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 DSC1Q08554 894 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PRPF4BQ13523 1007 aaKnown RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 TRIM14Q14142 442 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 FAM187BQ17R55 369 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 KIAA0319Q5VV43 1072 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ELMSAN1Q6PJG2 1045 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 INTS8Q75QN2 995 aaKnown RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PALB2Q86YC2 1186 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 GPD1LQ8N335 351 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ZBTB45Q96K62 511 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 ACO2Q99798 780 aaKnown RBP11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 NUP58Q9BVL2 599 aa11.8□□□□□ -0.52
HLA-DQA1-202ENST00000374949 NXF3Q9H4D5 531 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms