RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SNX17Q15036 470 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 C17orf50Q8WW18 174 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 TSEN34Q9BSV6 310 aaKnown RBP8.74□□□□□ -1.01
HSPG2-203ENST00000374695 DHX35Q9H5Z1 703 aaKnown RBP8.74□□□□□ -1.01
HSPG2-203ENST00000374695 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 PPP3CCP48454 512 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 PTPN12Q05209 780 aaKnown RBP8.74□□□□□ -1.01
HSPG2-203ENST00000374695 NBPF15Q8N660 670 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 STK33Q9BYT3 514 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 AFF4Q9UHB7 1163 aaKnown RBP8.74□□□□□ -1.01
HSPG2-203ENST00000374695 SAMD9Q5K651 1589 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 SAMD9LQ8IVG5 1584 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 KCNB1Q14721 858 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 BTBD8Q5XKL5 378 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 KLHL4Q9C0H6 718 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 PAK5Q9P286 719 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 SNX12Q9UMY4 172 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 PKP3Q9Y446 797 aa8.74□□□□□ -1.01
HSPG2-203ENST00000374695 BBOX1O75936 387 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 MLH1P40692 756 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 PEX3P56589 373 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CYFIP1Q7L576 1253 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 MOSPD2Q8NHP6 518 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 RHBDL2Q9NX52 303 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CIDEBQ9UHD4 219 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SCN4BQ8IWT1 228 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 MIEF2Q96C03 454 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ITIH6Q6UXX5 1313 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CAPN1P07384 714 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 KIAA0825Q8IV33 1275 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CYP4Z2PQ8N1L4 340 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CLMNQ96JQ2 1002 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 RBM15Q96T37 977 aaKnown RBP eCLIP8.73□□□□□ -1.015e-6■■□□□ 11.5
HSPG2-203ENST00000374695 MTA3Q9BTC8 594 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ASNSP08243 561 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CTCFP49711 727 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 TRAPPC11Q7Z392 1133 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 TNIP3Q96KP6 325 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ECSITQ9BQ95 431 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 EFNA5P52803 228 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 OSTNP61366 133 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 EPS8Q12929 822 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 KYNUQ16719 465 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SPATA4Q8NEY3 305 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 KPNA4O00629 521 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ALDH1A1P00352 501 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SHCBP1Q8NEM2 672 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 FRMD8P1Q9BZ68 369 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SPATA2Q9UM82 520 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 IL12RB1P42701 662 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SERPINH1P50454 418 aaKnown RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CTTNQ14247 550 aaKnown RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 PMF1Q6P1K2 205 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SENP7Q9BQF6 1050 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 HMG20AQ9NP66 347 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CACNA2D2Q9NY47 1150 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 POLR2EP19388 210 aaKnown RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 RASGRP4Q8TDF6 673 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 LATS2Q9NRM7 1088 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 TTKP33981 857 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SERPINB8P50452 374 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ARMC4Q5T2S8 1044 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CCDC81Q6ZN84 652 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 DGKHQ86XP1 1220 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 C11orf70Q9BRQ4 267 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 HEMGNQ9BXL5 484 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 FAM47E-STBD1D6RA91 191 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ZBTB5O15062 677 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ATP5BP06576 529 aaKnown RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CYP19A1P11511 503 aaPredicted RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 LRRC14Q15048 493 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 KCNV1Q6PIU1 500 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 RFX8Q6ZV50 586 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 GUF1Q8N442 669 aaKnown RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 OMA1Q96E52 524 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 CAMKK2Q96RR4 588 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 KLHL3Q9UH77 587 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ABCB11O95342 1321 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ADGRA2Q96PE1 1338 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 PHKA1P46020 1223 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 ARMCX6Q7L4S7 300 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 RMI1Q9H9A7 625 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 PRR23AA6NEV1 266 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 PRMT9Q6P2P2 845 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 GSPT2Q8IYD1 628 aaKnown RBP8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SERPINB12Q96P63 405 aa8.73□□□□□ -1.01
HSPG2-203ENST00000374695 SYNCRIPO60506 623 aaKnown RBP8.72□□□□□ -1.01
HSPG2-203ENST00000374695 SNRPAP09012 282 aaKnown RBP8.72□□□□□ -1.01
HSPG2-203ENST00000374695 GJA8P48165 433 aa8.72□□□□□ -1.01
HSPG2-203ENST00000374695 ARL4DP49703 201 aa8.72□□□□□ -1.01
HSPG2-203ENST00000374695 CACNB1Q02641 598 aaPredicted RBP8.72□□□□□ -1.01
HSPG2-203ENST00000374695 PFKFB3Q16875 520 aaPredicted RBP8.72□□□□□ -1.01
HSPG2-203ENST00000374695 L2HGDHQ9H9P8 463 aa8.72□□□□□ -1.01
HSPG2-203ENST00000374695 TM9SF1O15321 606 aa8.72□□□□□ -1.01
HSPG2-203ENST00000374695 PRCPP42785 496 aa8.72□□□□□ -1.01
HSPG2-203ENST00000374695 PRIM2P49643 509 aa8.72□□□□□ -1.01
HSPG2-203ENST00000374695 RNF25Q96BH1 459 aaPredicted RBP8.72□□□□□ -1.01
HSPG2-203ENST00000374695 TASP1Q9H6P5 420 aa8.72□□□□□ -1.01
HSPG2-203ENST00000374695 IARS2Q9NSE4 1012 aaKnown RBP8.72□□□□□ -1.01
HSPG2-203ENST00000374695 TMCC3Q9ULS5 477 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms