RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 HOXC6P09630 235 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 MCEEQ96PE7 176 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 FAM49AQ9H0Q0 323 aaPredicted RBP19.42■□□□□ 0.7
RXRB-202ENST00000374685 RPF1Q9H9Y2 349 aaKnown RBP19.42■□□□□ 0.7
RXRB-202ENST00000374685 ASB14A6NK59 587 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 PIK3R2O00459 728 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 GUCY1A3Q02108 690 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 MAMLD1Q13495 774 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 DUPD1Q68J44 220 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 CDCA2Q69YH5 1023 aaPredicted RBP19.42■□□□□ 0.7
RXRB-202ENST00000374685 TFAP2BQ92481 460 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 NIF3L1Q9GZT8 377 aa19.42■□□□□ 0.7
RXRB-202ENST00000374685 MYZAPP0CAP1 466 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 RALAP11233 206 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 CHRNA3P32297 505 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 COILP38432 576 aaPredicted RBP19.41■□□□□ 0.7
RXRB-202ENST00000374685 MBTD1Q05BQ5 628 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 MCL1Q07820 350 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 KRT71Q3SY84 523 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 DCUN1D2Q6PH85 259 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 C2orf40Q9H1Z8 148 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 TJP2Q9UDY2 1190 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 ASIC3Q9UHC3 531 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 PNMA3Q9UL41 463 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 R3HDM2Q9Y2K5 976 aaKnown RBP19.41■□□□□ 0.7
RXRB-202ENST00000374685 FAM169AQ9Y6X4 670 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 C22orf31O95567 290 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 ITGB3P05106 788 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 LACTBP83111 547 aaPredicted RBP19.41■□□□□ 0.7
RXRB-202ENST00000374685 PRAMEF19Q5SWL8 479 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 ZNF677Q86XU0 584 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 ZC3H15Q8WU90 426 aaKnown RBP19.41■□□□□ 0.7
RXRB-202ENST00000374685 ANKRD36BP1Q96IX9 119 aa19.41■□□□□ 0.7
RXRB-202ENST00000374685 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.41■□□□□ 0.7
RXRB-202ENST00000374685 IGKV6-21A0A0C4DH24 114 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 GLTPD2A6NH11 291 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 ABLIM1O14639 778 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 ATF7P17544 494 aaPredicted RBP19.4■□□□□ 0.7
RXRB-202ENST00000374685 PTGIRP43119 386 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 ZNF844Q08AG5 666 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 FBXW10Q5XX13 1052 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 MREGQ8N565 214 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 LENG1Q96BZ8 264 aaPredicted RBP19.4■□□□□ 0.7
RXRB-202ENST00000374685 HAUS1Q96CS2 278 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 FAM81BQ96LP2 452 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 PPP1R12AO14974 1030 aaPredicted RBP19.4■□□□□ 0.7
RXRB-202ENST00000374685 KRT10P13645 584 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 CCNA1P78396 465 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 TAPT1Q6NXT6 567 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 BRI3BPQ8WY22 251 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 IFT122Q9HBG6 1241 aa19.4■□□□□ 0.7
RXRB-202ENST00000374685 LACTBL1A8MY62 500 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 DCDC2CA8MYV0 355 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 EBAG9O00559 213 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 SHBGP04278 402 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 STAG3L1P0CL83 205 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 CTNNA2P26232 953 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 PSMC4P43686 418 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 SLCO1A2P46721 670 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 MCCD1P59942 119 aaPredicted RBP19.39■□□□□ 0.7
RXRB-202ENST00000374685 DHX34Q14147 1143 aaKnown RBP19.39■□□□□ 0.7
RXRB-202ENST00000374685 SGSM1Q2NKQ1 1148 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 LDLRAD1Q5T700 205 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 JADE1Q6IE81 842 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 HMGXB4Q9UGU5 601 aa19.39■□□□□ 0.7
RXRB-202ENST00000374685 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.39■□□□□ 0.7
RXRB-202ENST00000374685 NR1D1P20393 614 aa19.39■□□□□ 0.69
RXRB-202ENST00000374685 IRAK1P51617 712 aa19.39■□□□□ 0.69
RXRB-202ENST00000374685 KRT17Q04695 432 aa19.39■□□□□ 0.69
RXRB-202ENST00000374685 KIZQ2M2Z5 673 aa19.39■□□□□ 0.69
RXRB-202ENST00000374685 TSHZ1Q6ZSZ6 1077 aa19.39■□□□□ 0.69
RXRB-202ENST00000374685 FZD8Q9H461 694 aa19.39■□□□□ 0.69
RXRB-202ENST00000374685 A0A0G2JMZ2 1700 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 F8VP50 259 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 H3BRB1 525 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 PROSCO94903 275 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 ECEL1O95672 775 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 GH1P01241 217 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 SIX1Q15475 284 aaPredicted RBP19.38■□□□□ 0.69
RXRB-202ENST00000374685 DNAJC24Q6P3W2 148 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 ANKS1BQ7Z6G8 1248 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.38■□□□□ 0.69
RXRB-202ENST00000374685 TRIM11Q96F44 468 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 L3MBTL3Q96JM7 780 aaPredicted RBP19.38■□□□□ 0.69
RXRB-202ENST00000374685 ATP6V1G3Q96LB4 118 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 JPH2Q9BR39 696 aaPredicted RBP19.38■□□□□ 0.69
RXRB-202ENST00000374685 PLVAPQ9BX97 442 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 MAF1Q9H063 256 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 TUT1Q9H6E5 874 aaKnown RBP19.38■□□□□ 0.69
RXRB-202ENST00000374685 SMYD3Q9H7B4 428 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 NOVA2Q9UNW9 492 aaKnown RBP19.38■□□□□ 0.69
RXRB-202ENST00000374685 PHKA2P46019 1235 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 LAMC2Q13753 1193 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 TCEAL1Q15170 157 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 ZDHHC24Q6UX98 284 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 MORC4Q8TE76 937 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 PWWP2AQ96N64 755 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 ZDHHC18Q9NUE0 388 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 MYBL1P10243 752 aa19.38■□□□□ 0.69
RXRB-202ENST00000374685 KIAA0319LQ8IZA0 1049 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms