RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MAN2A1Q16706 1144 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 PLPP4Q5VZY2 271 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 ANKS3Q6ZW76 656 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 CEP57Q86XR8 500 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 CREBRFQ8IUR6 639 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 DHX40Q8IX18 779 aaKnown RBP12.21□□□□□ -0.45
HSPG2-202ENST00000374676 TMEM86AQ8N2M4 240 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 AOPEPQ8N6M6 819 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 TOP6BLQ8N6T0 577 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 PPP2R3CQ969Q6 453 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 FAXDC2Q96IV6 333 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 B3GALT6Q96L58 329 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 TUBGCP2Q9BSJ2 902 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 OXCT2Q9BYC2 517 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-202ENST00000374676 HSD3B7Q9H2F3 369 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 NSUN3Q9H649 340 aaKnown RBP12.21□□□□□ -0.45
HSPG2-202ENST00000374676 MMRN2Q9H8L6 949 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 RAB20Q9NX57 234 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 SNX9Q9Y5X1 595 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 BACE2Q9Y5Z0 518 aa12.21□□□□□ -0.45
HSPG2-202ENST00000374676 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-202ENST00000374676 BECN2A8MW95 431 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 HUS1O60921 280 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 FOSL2P15408 326 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 PIK3CAP42336 1068 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 PSMD5Q16401 504 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 ZNF699Q32M78 642 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 WDR72Q3MJ13 1102 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 ZNF667Q5HYK9 610 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 VARS2Q5ST30 1063 aaKnown RBP12.2□□□□□ -0.46
HSPG2-202ENST00000374676 CCDC150Q8NCX0 1101 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 AUTS2Q8WXX7 1259 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 SEMA4DQ92854 862 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 KLHL5Q96PQ7 755 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 CDCA3Q99618 268 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-202ENST00000374676 EMILIN2Q9BXX0 1053 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 IMPG2Q9BZV3 1241 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 MTRRQ9UBK8 725 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
HSPG2-202ENST00000374676 PCDHGC5Q9Y5F6 944 aa12.2□□□□□ -0.46
HSPG2-202ENST00000374676 TSC2P49815 1807 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 FSD2A1L4K1 749 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 GTPBP10A4D1E9 387 aaKnown RBP12.19□□□□□ -0.46
HSPG2-202ENST00000374676 C2CD2LO14523 706 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 TEX28O15482 410 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 TACC1O75410 805 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 CNPP09543 421 aaKnown RBP12.19□□□□□ -0.46
HSPG2-202ENST00000374676 P4HA1P13674 534 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
HSPG2-202ENST00000374676 TNNC1P63316 161 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 MYL7Q01449 175 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 YWHAHQ04917 246 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-202ENST00000374676 DUSP6Q16828 381 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 SOWAHAQ2M3V2 549 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 VWA3BQ502W6 1294 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 TCEAL5Q5H9L2 206 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 WDR44Q5JSH3 913 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 MIIPQ5JXC2 388 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 WSCD1Q658N2 575 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 OVOS1Q6IE37 1185 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 ZNF280DQ6N043 979 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 PRSS55Q6UWB4 352 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-202ENST00000374676 METTL23Q86XA0 190 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 PDCL2Q8N4E4 241 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 EHBP1Q8NDI1 1231 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 ANKRD20A12PQ8NF67 263 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 CLSTN3Q9BQT9 956 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 NDST4Q9H3R1 872 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 TSPY26PQ9H489 355 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 TLE6Q9H808 572 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 L1RE1Q9UN81 338 aa12.19□□□□□ -0.46
HSPG2-202ENST00000374676 TIMM13Q9Y5L4 95 aaPredicted RBP12.19□□□□□ -0.46
HSPG2-202ENST00000374676 OR6C75A6NL08 312 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 GABRDO14764 452 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 NCK2O43639 380 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 CLASP2O75122 1294 aaKnown RBP12.18□□□□□ -0.46
HSPG2-202ENST00000374676 LRRN2O75325 713 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 ADH1AP07327 375 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 LHX1P48742 406 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 NDUFV1P49821 464 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 NOP14P78316 857 aaKnown RBP12.18□□□□□ -0.46
HSPG2-202ENST00000374676 KRT31Q15323 416 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 CTXN3Q4LDR2 81 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 SLC8B1Q6J4K2 584 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 RSPO2Q6UXX9 243 aaPredicted RBP12.18□□□□□ -0.46
HSPG2-202ENST00000374676 ADGRD2Q7Z7M1 963 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 PPFIBP1Q86W92 1011 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 THEM5Q8N1Q8 247 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 LMO3Q8TAP4 145 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 ANP32EQ9BTT0 268 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 PI4K2AQ9BTU6 479 aa12.18□□□□□ -0.46
HSPG2-202ENST00000374676 FAM124BQ9H5Z6 455 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms