RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SELPP16109 830 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SLCO1A2P46721 670 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RUNX1T1Q06455 604 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CUL3Q13618 768 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 BYSLQ13895 437 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CCDC144BQ3MJ40 725 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 KIAA1324Q6UXG2 1013 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NLRP14Q86W24 1093 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ZNF555Q8NEP9 628 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 GPT2Q8TD30 523 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ZNF560Q96MR9 790 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CALN1Q9BXU9 219 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SAYSD1Q9NPB0 183 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 DCP1AQ9NPI6 582 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NDUFA13Q9P0J0 144 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ADAM21Q9UKJ8 722 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 BCL9LQ86UU0 1499 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 BTBD18B2RXH4 712 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 RASSF9O75901 435 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 PRKCQQ04759 706 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 E2F4Q16254 413 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 OR6B2Q6IFH4 312 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NOTUMQ6P988 496 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 SYDE1Q6ZW31 735 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 CDKL3Q8IVW4 592 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 EFHBQ8N7U6 833 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 FAF2Q96CS3 445 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 TRIM62Q9BVG3 475 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 ATXN3LQ9H3M9 355 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 GOLPH3LQ9H4A5 285 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 OLA1Q9NTK5 396 aaKnown RBP6.61□□□□□ -1.35
PTPN3-202ENST00000374541 USP54Q70EL1 1684 aa6.61□□□□□ -1.35
PTPN3-202ENST00000374541 NALCNQ8IZF0 1738 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 AKAP12Q02952 1782 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 COL14A1Q05707 1796 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 FZD9O00144 591 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 USP2O75604 605 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 TCF7P36402 384 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 CAPRIN1Q14444 709 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ADRM1Q16186 407 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ALKBH5Q6P6C2 394 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 APOA5Q6Q788 366 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 PLEKHM3Q6ZWE6 761 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 LUZP2Q86TE4 346 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 FAM133AQ8N9E0 248 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ATP11CQ8NB49 1132 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 TTC17Q96AE7 1141 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 BPIFA3Q9BQP9 254 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 NDST4Q9H3R1 872 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ASNSD1Q9NWL6 643 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 SMG5Q9UPR3 1016 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 FTCDO95954 541 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ALADP13716 330 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 NFIAQ12857 509 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 SLC30A9Q6PML9 568 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 PRUNE1Q86TP1 453 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 RNF217Q8TC41 542 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ATP6V1G3Q96LB4 118 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 TGS1Q96RS0 853 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 SETD4Q9NVD3 440 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 DDX56Q9NY93 547 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 TBK1Q9UHD2 729 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 SLC25A13Q9UJS0 675 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 AP3B2Q13367 1082 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 HIC1Q14526 733 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 KRT72Q14CN4 511 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 TMEM259Q4ZIN3 620 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 KIAA1755Q5JYT7 1200 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 FKBP1CQ5VVH2 108 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 FBXO38Q6PIJ6 1188 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 LRRC69Q6ZNQ3 347 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ADCK1Q86TW2 530 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 GPIHBP1Q8IV16 184 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ACER1Q8TDN7 264 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 HLA-CQ95604 372 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 C19orf60Q96EN9 201 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 KCNK16Q96T55 309 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 GPR20Q99678 358 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 VIPAS39Q9H9C1 493 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 MAN1B1Q9UKM7 699 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 CAB39Q9Y376 341 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHA10Q9Y5I2 948 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 GOLGA8SH3BPF8 625 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 PIK3R2O00459 728 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 FGGP02679 453 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 MAP4P27816 1152 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 PMS2P54278 862 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 MRPS5P82675 430 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 DHX34Q14147 1143 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 IMPG1Q17R60 797 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 INAVAQ3KP66 663 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 TERB1Q8NA31 727 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 TEKT4Q8WW24 435 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 DNAJB3Q8WWF6 145 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 RIN2Q8WYP3 895 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 ULK4Q96C45 1275 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 RMDN2Q96LZ7 410 aa6.6□□□□□ -1.35
PTPN3-202ENST00000374541 GTPBP2Q9BX10 602 aaKnown RBP6.6□□□□□ -1.35
PTPN3-202ENST00000374541 CCDC90BQ9GZT6 254 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms