RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PLEKHA7Q6IQ23 1121 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 CPNE8Q86YQ8 564 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 ANKS4BQ8N8V4 417 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 CCDC89Q8N998 374 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 RBBP8NLQ8NC74 664 aaPredicted RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 EXD1Q8NHP7 514 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 C1orf54Q8WWF1 131 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 ATXN2LQ8WWM7 1075 aaKnown RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 CPA5Q8WXQ8 436 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 SCLT1Q96NL6 688 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 MSTO1Q9BUK6 570 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 IMPG2Q9BZV3 1241 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 ASCC2Q9H1I8 757 aaPredicted RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 NRBP2Q9NSY0 501 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 INTS9Q9NV88 658 aaKnown RBP14.81□□□□□ -0.04
HMGCL-203ENST00000374490 ADAM22Q9P0K1 906 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 IP6K2Q9UHH9 426 aa14.81□□□□□ -0.04
HMGCL-203ENST00000374490 UMODL1Q5DID0 1318 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 IGKV6D-21A0A0A0MT36 114 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 LRRIQ4A6NIV6 560 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 VNN1O95497 513 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 LSM8O95777 96 aaKnown RBP14.8□□□□□ -0.04
HMGCL-203ENST00000374490 ITIH4Q14624 930 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 SURF1Q15526 300 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 CRELD2Q6UXH1 353 aaPredicted RBP14.8□□□□□ -0.04
HMGCL-203ENST00000374490 ZPBP2Q6X784 338 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 RIOX2Q8IUF8 465 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 ANKRD35Q8N283 1001 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 CCDC197Q8NCU1 140 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 ASAP3Q8TDY4 903 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 RBM41Q96IZ5 413 aaKnown RBP14.8□□□□□ -0.04
HMGCL-203ENST00000374490 CDC42EP4Q9H3Q1 356 aaKnown RBP14.8□□□□□ -0.04
HMGCL-203ENST00000374490 CHST7Q9NS84 486 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 PARVAQ9NVD7 372 aa14.8□□□□□ -0.04
HMGCL-203ENST00000374490 SIP14410 1827 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 THAP12O43422 761 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 CALB1P05937 261 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 EFNA5P52803 228 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 NOP14P78316 857 aaKnown RBP14.79□□□□□ -0.04
HMGCL-203ENST00000374490 SP4Q02446 784 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 TAP1Q03518 808 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 CRHR2Q13324 411 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 KLF1Q13351 362 aaPredicted RBP14.79□□□□□ -0.04
HMGCL-203ENST00000374490 QPCTQ16769 361 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 ZNF365Q70YC5 407 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 CCDC25Q86WR0 208 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 RELL1Q8IUW5 271 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 FEZF2Q8TBJ5 459 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 EPS8L3Q8TE67 593 aaKnown RBP14.79□□□□□ -0.04
HMGCL-203ENST00000374490 TMEM143Q96AN5 459 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 FAM167AQ96KS9 214 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 CCDC114Q96M63 670 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 ZNF317Q96PQ6 595 aaPredicted RBP14.79□□□□□ -0.04
HMGCL-203ENST00000374490 CCDC77Q9BR77 488 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 C11orf70Q9BRQ4 267 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 SPATC1LQ9H0A9 340 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 ADAM7Q9H2U9 754 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 KDM4CQ9H3R0 1056 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 BTBD7Q9P203 1132 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 ANAPC5Q9UJX4 755 aa14.79□□□□□ -0.04
HMGCL-203ENST00000374490 ADGRA2Q96PE1 1338 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 CNTNAP2Q9UHC6 1331 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 SMIM23A6NLE4 172 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 GAS2O43903 313 aaKnown RBP14.78□□□□□ -0.04
HMGCL-203ENST00000374490 TTC4O95801 387 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 ACOT2P49753 483 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 ITGA8P53708 1063 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 MCL1Q07820 350 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 MAMLD1Q13495 774 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 SNX1Q13596 522 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 NCAPG2Q86XI2 1143 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 WDR49Q8IV35 697 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 CCDC50Q8IVM0 306 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 BRSK2Q8IWQ3 736 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 EXOC8Q8IYI6 725 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 MDM1Q8TC05 714 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 OSBPL8Q9BZF1 889 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 APOBEC3GQ9HC16 384 aaKnown RBP14.78□□□□□ -0.04
HMGCL-203ENST00000374490 LRRC4CQ9HCJ2 640 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 SAMD15Q9P1V8 674 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
HMGCL-203ENST00000374490 ADCY3O60266 1144 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 SLC25A27O95847 323 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 ATP4AP20648 1035 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 IVDP26440 423 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 GJA5P36382 358 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 ADCY8P40145 1251 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 ZNF132P52740 706 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 COPS2P61201 443 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 IFI35P80217 286 aaPredicted RBP14.77□□□□□ -0.04
HMGCL-203ENST00000374490 NCOA4Q13772 614 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 TARBP2Q15633 366 aaKnown RBP14.77□□□□□ -0.04
HMGCL-203ENST00000374490 LMBRD2Q68DH5 695 aaPredicted RBP14.77□□□□□ -0.04
HMGCL-203ENST00000374490 DRICH1Q6PGQ1 229 aaPredicted RBP14.77□□□□□ -0.04
HMGCL-203ENST00000374490 TMEM270Q6UE05 265 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 RIBC1Q8N443 379 aaPredicted RBP14.77□□□□□ -0.04
HMGCL-203ENST00000374490 UBR7Q8N806 425 aa14.77□□□□□ -0.04
HMGCL-203ENST00000374490 CD99L2Q8TCZ2 262 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms