RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PYGMP11217 842 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRPF4-202ENST00000374199 PKDCCQ504Y2 493 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 NAA35Q5VZE5 725 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 SLC27A1Q6PCB7 646 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 KATNAL2Q8IYT4 538 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 FNIP1Q8TF40 1166 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.38□□□□□ -0.274e-7■■■■■ 78.7
PRPF4-202ENST00000374199 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
PRPF4-202ENST00000374199 NEU2Q9Y3R4 380 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 SCN1AP35498 2009 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 PATJQ8NI35 1801 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 FAM187AA6NFU0 413 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 PHF2O75151 1096 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
PRPF4-202ENST00000374199 TAP1Q03518 808 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 TAZQ16635 292 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 THNSL1Q8IYQ7 743 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 IQCKQ8N0W5 287 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 FAM129AQ9BZQ8 928 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 CDHR5Q9HBB8 845 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 MRPL47Q9HD33 250 aaKnown RBP13.38□□□□□ -0.27
PRPF4-202ENST00000374199 ZDHHC18Q9NUE0 388 aa13.38□□□□□ -0.27
PRPF4-202ENST00000374199 KRIT1O00522 736 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CA12O43570 354 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 DUSP11O75319 330 aaKnown RBP13.37□□□□□ -0.27
PRPF4-202ENST00000374199 KCNE1P15382 129 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 IGBP1P78318 339 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 SLC7A5Q01650 507 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CRHR2Q13324 411 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CCDC102AQ96A19 550 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 RUNDC3BQ96NL0 473 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 ZFYVE28Q9HCC9 887 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 SEPT11Q9NVA2 429 aaKnown RBP13.37□□□□□ -0.27
PRPF4-202ENST00000374199 PARVAQ9NVD7 372 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CYTH4Q9UIA0 394 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CALB1P05937 261 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 WEE2P0C1S8 567 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CARSP49589 748 aaKnown RBP13.37□□□□□ -0.27
PRPF4-202ENST00000374199 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CCSAPQ6IQ19 270 aaPredicted RBP13.37□□□□□ -0.27
PRPF4-202ENST00000374199 SLC13A5Q86YT5 568 aaPredicted RBP13.37□□□□□ -0.27
PRPF4-202ENST00000374199 LRRC52Q8N7C0 313 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 TRIM7Q9C029 511 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 TP73O15350 636 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 CHRNA3P32297 505 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 FNTAP49354 379 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 TMEM132DQ14C87 1099 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 BTBD6Q96KE9 485 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 GCOM2Q9BZD3 368 aaPredicted RBP13.37□□□□□ -0.27
PRPF4-202ENST00000374199 ELOVL4Q9GZR5 314 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
PRPF4-202ENST00000374199 ZSCAN5CA6NGD5 496 aaPredicted RBP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 PHACTR2O75167 634 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 ZMYND10O75800 440 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 RWDD2BP57060 319 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 PAK2Q13177 524 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 ALS2CLQ60I27 953 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 TMEM40Q8WWA1 233 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 NLRP7Q8WX94 980 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 ZMAT2Q96NC0 199 aaKnown RBP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 ACAP3Q96P50 834 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 KIAA1257Q9ULG3 409 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 DYNC1LI2O43237 492 aaPredicted RBP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 HARSP12081 509 aaKnown RBP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 CYP3A5P20815 502 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 CRYBB1P53674 252 aaPredicted RBP13.36□□□□□ -0.27
PRPF4-202ENST00000374199 CBX1P83916 185 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 MGAT3Q09327 533 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 MESDQ14696 234 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 SNX17Q15036 470 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 TTC27Q6P3X3 843 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 FEZF2Q8TBJ5 459 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 FAM71BQ8TC56 605 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 AP1M1Q9BXS5 423 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 PSD3Q9NYI0 1048 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 ADAM22Q9P0K1 906 aa13.36□□□□□ -0.27
PRPF4-202ENST00000374199 H0YGN5 161 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 PIRO00625 290 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 THAP12O43422 761 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 NPTXRO95502 500 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 HMGCRP04035 888 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 TRPC3Q13507 836 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 LIN9Q5TKA1 542 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 NOTUMQ6P988 496 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 APBB1IPQ7Z5R6 666 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 TWNKQ96RR1 684 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 CXCL16Q9H2A7 254 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 EPB41L5Q9HCM4 733 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms