RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 CALB1P05937 261 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 CD58P19256 250 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 CDH5P33151 784 aaPredicted RBP13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 XRCC4Q13426 336 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 PRAMEF18Q5VWM3 479 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 IZUMO3Q5VZ72 239 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 SCARA3Q6AZY7 606 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 ZCCHC9Q8N567 271 aaKnown RBP13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 ANKS4BQ8N8V4 417 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 RBM41Q96IZ5 413 aaKnown RBP13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 SLITRK1Q96PX8 696 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
TSPAN6-201ENST00000373020 TTLL13PA6NNM8 815 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 ABLIM1O14639 778 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 LIASO43766 372 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 MSCO60682 206 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 GJB6O95452 261 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 GSTA1P08263 222 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 RPL7AP62424 266 aaKnown RBP13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 SWT1Q5T5J6 900 aaKnown RBP13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 LBX2Q6XYB7 198 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 RCOR2Q8IZ40 523 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 PWWP2AQ96N64 755 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 IMPG2Q9BZV3 1241 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 SAMD15Q9P1V8 674 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 CTNNAL1Q9UBT7 734 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 PPP2R3BQ9Y5P8 575 aa13.3□□□□□ -0.28
TSPAN6-201ENST00000373020 TOM1L1O75674 476 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CETPP11597 493 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 TCF4P15884 667 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CREB1P16220 341 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 SSTR3P32745 418 aaPredicted RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 TNFSF9P41273 254 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 VPS41P49754 854 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 EFNA5P52803 228 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 LMNB2Q03252 620 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 STAT4Q14765 748 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CCDC142Q17RM4 750 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 SEPT14Q6ZU15 432 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 NIPA2Q8N8Q9 360 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CCHCR1Q8TD31 782 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 FAM118BQ9BPY3 351 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 NIF3L1Q9GZT8 377 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 NRBP2Q9NSY0 501 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 DNAJC17Q9NVM6 304 aaKnown RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 RGS17Q9UGC6 210 aaPredicted RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 SLC12A4Q9UP95 1085 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 USTQ9Y2C2 406 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 ACTL7BQ9Y614 415 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 ANK1P16157 1881 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 DNALI1O14645 258 aaPredicted RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 SNX3O60493 162 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CDH16O75309 829 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CST3P01034 146 aaPredicted RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 CETN2P41208 172 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 IFNAR2P48551 515 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 COPS2P61201 443 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 SEZ6Q53EL9 994 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 EAPPQ56P03 285 aaPredicted RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 FAM160B1Q5W0V3 765 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 RIOX2Q8IUF8 465 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 RIBC1Q8N443 379 aaPredicted RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.29□□□□□ -0.286e-11■□□□□ 10.1
TSPAN6-201ENST00000373020 MRPL4Q9BYD3 311 aaKnown RBP13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 ZNF518BQ9C0D4 1074 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 KLC4Q9NSK0 619 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 PCDHGC3Q9UN70 934 aa13.29□□□□□ -0.28
TSPAN6-201ENST00000373020 KRT1P04264 644 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 VIMP08670 466 aaKnown RBP13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 GJC1P36383 396 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 BAG6P46379 1132 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 STAT5BP51692 787 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 OGDHQ02218 1023 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 TAP1Q03518 808 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 MPP2Q14168 576 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 DEFB132Q7Z7B7 95 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 FUKQ8N0W3 1084 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 ANKRD35Q8N283 1001 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 ALLCQ8N6M5 410 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 CKAP2Q8WWK9 683 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 ELAC2Q9BQ52 826 aaKnown RBP13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 MTMR12Q9C0I1 747 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.28□□□□□ -0.286e-8■■■■■ 28.8
TSPAN6-201ENST00000373020 hCG_1818297A0A087WSY0 165 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 SOWAHBA6NEL2 793 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 OGTO15294 1046 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 HARSP12081 509 aaKnown RBP13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 NEDD9Q14511 834 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 SURF1Q15526 300 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 OASLQ15646 514 aaKnown RBP13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 P3H1Q32P28 736 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 ATP13A4Q4VNC1 1196 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 DNAJC24Q6P3W2 148 aa13.28□□□□□ -0.28
TSPAN6-201ENST00000373020 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms