RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 RPA1P27694 616 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 CHRNA3P32297 505 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 HPDP32754 393 aaPredicted RBP13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 CIITAP33076 1130 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 DHX9Q08211 1270 aaKnown RBP13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 BMT2Q1RMZ1 405 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 GALNTL6Q49A17 601 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 ALKBH5Q6P6C2 394 aaKnown RBP13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.73□□□□□ -0.214e-8■■■■■ 50.5
CHCHD1-202ENST00000372837 STXBP4Q6ZWJ1 553 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 TRMT10CQ7L0Y3 403 aaKnown RBP13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 CEP57Q86XR8 500 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 METTL13Q8N6R0 699 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 UBLCP1Q8WVY7 318 aaPredicted RBP13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 FAXDC2Q96IV6 333 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 FBXO40Q9UH90 709 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 KIAA1024Q9UPX6 916 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 PCDHA2Q9Y5H9 948 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 ACTL7BQ9Y614 415 aa13.73□□□□□ -0.21
CHCHD1-202ENST00000372837 MYH7BA7E2Y1 1941 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SPDYE3A6NKU9 549 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 HNRNPCL1O60812 293 aaKnown RBP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 ZBED4O75132 1171 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 TCEA3O75764 348 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SUN1O94901 812 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 FTCDO95954 541 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 CYP3A4P08684 503 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 RARGP13631 454 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SELPP16109 830 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SREBF1P36956 1147 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 PMS2P54278 862 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 ARHGAP4P98171 946 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 PTPN11Q06124 597 aaPredicted RBP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 DUSP28Q4G0W2 176 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 DENND2CQ68D51 928 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SYDE1Q6ZW31 735 aaPredicted RBP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 KCNK18Q7Z418 384 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 NT5DC3Q86UY8 548 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 FBXO11Q86XK2 927 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 KLHL7Q8IXQ5 586 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 TMEM192Q8IY95 271 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SYT2Q8N9I0 419 aaPredicted RBP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 RAB3IPQ96QF0 476 aaPredicted RBP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SPAG5Q96R06 1193 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 POLR3CQ9BUI4 534 aaPredicted RBP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 TRIM7Q9C029 511 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 KCTD10Q9H3F6 313 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 CENPHQ9H3R5 247 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 SLC38A10Q9HBR0 1119 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 PCYOX1Q9UHG3 505 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 NOD1Q9Y239 953 aa13.72□□□□□ -0.21
CHCHD1-202ENST00000372837 USP24Q9UPU5 2620 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 EFCAB14O75071 495 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 EYA4O95677 639 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 OAS1P00973 400 aaKnown RBP13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 AFPP02771 609 aaKnown RBP13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 SLC12A3P55017 1021 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 ADAM9Q13443 819 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 IKBKEQ14164 716 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 PPP1R7Q15435 360 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 PARP6Q2NL67 630 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 DPY19L2P1Q6NXN4 242 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 RHOT2Q8IXI1 618 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 TMEM105Q8N8V8 129 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 CRYGNQ8WXF5 182 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 RFFLQ8WZ73 363 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 DHX38Q92620 1227 aaKnown RBP13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 SLCO2A1Q92959 643 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 HPS3Q969F9 1004 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 MSLNLQ96KJ4 702 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 SERPINB12Q96P63 405 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 SH3GL3Q99963 347 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 ZDHHC18Q9NUE0 388 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 INTS9Q9NV88 658 aaKnown RBP13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 SEL1LQ9UBV2 794 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 ARMCX3Q9UH62 379 aaPredicted RBP13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 ADAMTS1Q9UHI8 967 aa13.71□□□□□ -0.21
CHCHD1-202ENST00000372837 MYH10P35580 1976 aa13.71□□□□□ -0.22
CHCHD1-202ENST00000372837 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 PIK3CDO00329 1044 aa13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 RGS16O15492 202 aaPredicted RBP13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 SNX3O60493 162 aa13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 MMEP08473 750 aa13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 UCHL3P15374 230 aa13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 NQO1P15559 274 aaKnown RBP13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 MAN1A1P33908 653 aa13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 STAT1P42224 750 aa13.7□□□□□ -0.22
CHCHD1-202ENST00000372837 CPT1AP50416 773 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms