RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 EMC2Q15006 297 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 SDE2Q6IQ49 451 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 ZNF512Q96ME7 567 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 NT5C1AQ9BXI3 368 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 VPS33BQ9H267 617 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 TMEM245Q9H330 911 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 TBC1D23Q9NUY8 699 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 SATB2Q9UPW6 733 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 CDY2AQ9Y6F7 541 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 CDY1Q9Y6F8 540 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 USP27XA6NNY8 438 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 WEE2P0C1S8 567 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 LONRF1Q17RB8 773 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 CCDC92Q53HC0 331 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 ZNF677Q86XU0 584 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 TMEM143Q96AN5 459 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 TRIM51Q9BSJ1 452 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 C6orf203Q9P0P8 240 aaPredicted RBP12.06□□□□□ -0.48
VCL-202ENST00000372755 GRID1Q9ULK0 1009 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 DTNAQ9Y4J8 743 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 PRRG1O14668 218 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 CYP27B1O15528 508 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 ACOT2P49753 483 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 EFHC1Q5JVL4 640 aa12.06□□□□□ -0.48
VCL-202ENST00000372755 DDX42Q86XP3 938 aaKnown RBP eCLIP12.06□□□□□ -0.481e-10■■□□□ 12.4
VCL-202ENST00000372755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.06□□□□□ -0.486e-11■■■□□ 18.8
VCL-202ENST00000372755 A0A1B0GTH6 734 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 EVPLLA8MZ36 301 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 CYP19A1P11511 503 aaPredicted RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 EIF2B5Q13144 721 aaKnown RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 WLSQ5T9L3 541 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 SEPT5Q99719 369 aaPredicted RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 GPD1P21695 349 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 NAB2Q15742 525 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 ADSSL1Q8N142 457 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 SRBD1Q8N5C6 995 aaKnown RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 HES6Q96HZ4 224 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 ISCA1Q9BUE6 129 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 MORC2Q9Y6X9 1032 aaPredicted RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 UBXN8O00124 270 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 KCTD17Q8N5Z5 321 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 FAM84BQ96KN1 310 aaPredicted RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 FRMD8Q9BZ67 464 aaPredicted RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 ELP3Q9H9T3 547 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 POLRMTO00411 1230 aaKnown RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 FOXN1O15353 648 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 UCHL3P15374 230 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 VSNL1P62760 191 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 EDRF1Q3B7T1 1238 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 SYCP2LQ5T4T6 812 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 NAPEPLDQ6IQ20 393 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 UGT3A1Q6NUS8 523 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 REEP2Q9BRK0 252 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 HEATR9A2RTY3 570 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 SOAT1P35610 550 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 PCSK7Q16549 785 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 SLC25A41Q8N5S1 370 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 INPP5DQ92835 1189 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 PARK7Q99497 189 aaKnown RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 PHF20Q9BVI0 1012 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 TRPC5OSA6NMA1 111 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 P4HA2O15460 535 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 RPS6KA5O75582 802 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 RHOBTB3O94955 611 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 ZNF543Q08ER8 600 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 MAPRE1Q15691 268 aaKnown RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 LINC00523Q86TU6 105 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 METTL16Q86W50 562 aaKnown RBP12.05□□□□□ -0.48
VCL-202ENST00000372755 OOSP2Q86WS3 158 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 C4orf33Q8N1A6 199 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 ARMC2Q8NEN0 867 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 DTX3LQ8TDB6 740 aa12.05□□□□□ -0.48
VCL-202ENST00000372755 SPATA31A3Q5VYP0 1347 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 IRF1P10914 325 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 RGS2P41220 211 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 HARS2P49590 506 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 TWF1Q12792 350 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 XPO6Q96QU8 1125 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 GPR63Q9BZJ6 419 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
VCL-202ENST00000372755 SEPT3Q9UH03 358 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 CHMP2BQ9UQN3 213 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 TOMM70O94826 608 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 PDGFRBP09619 1106 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 P3H2Q8IVL5 708 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 OSBPL10Q9BXB5 764 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 NYAP2Q9P242 653 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 APPL1Q9UKG1 709 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 PCDHB2Q9Y5E7 798 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 M0R3G1 203 aa12.04□□□□□ -0.48
VCL-202ENST00000372755 AIM2O14862 343 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms