RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RPL7AP62424 266 aaKnown RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 LMNB2Q03252 620 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 CCDC15Q0P6D6 951 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 EMC2Q15006 297 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 E2F5Q15329 346 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 PPP1R2P3Q6NXS1 205 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 CEP128Q6ZU80 1094 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 TRABD2AQ86V40 505 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 PNMA8AQ86V59 439 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 CCHCR1Q8TD31 782 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 ZBTB45Q96K62 511 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 VPS33BQ9H267 617 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 EBF2Q9HAK2 575 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 NKIRAS1Q9NYS0 192 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 IP6K2Q9UHH9 426 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 USTQ9Y2C2 406 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 CTDP1Q9Y5B0 961 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 DOCK1Q14185 1865 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 PHIPQ8WWQ0 1821 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 TMEM191CA6NGB0 347 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 ASMTLO95671 621 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 TMEM191BP0C7N4 346 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 CCNB1P14635 433 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 EZRP15311 586 aaKnown RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 ATP4AP20648 1035 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 TBXAS1P24557 533 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 ALDH5A1P51649 535 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 ZKSCAN8Q15776 578 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 XKR3Q5GH77 459 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 SCARA3Q6AZY7 606 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 ANKRD35Q8N283 1001 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 ALLCQ8N6M5 410 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 GRAMD1AQ96CP6 724 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
CTPS1-202ENST00000372621 KCNG1Q9UIX4 513 aa13.5□□□□□ -0.25
CTPS1-202ENST00000372621 FAM47DPA6NHR8 397 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 RASA4BC9J798 803 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 IGF2BP3O00425 579 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 RASA4O43374 803 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 KRT10P13645 584 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 SLC18A1P54219 525 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 CXCL9Q07325 125 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 EAPPQ56P03 285 aaPredicted RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 ASAP3Q8TDY4 903 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 NSUN6Q8TEA1 469 aaKnown RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 CGRRF1Q99675 332 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 UBN1Q9NPG3 1134 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 KLHL11Q9NVR0 708 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 SPATA31C2B4DYI2 1134 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 EDN1P05305 212 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 GLRA2P23416 452 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 NOP14P78316 857 aaKnown RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 MTERF2Q49AM1 385 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 LRRC38Q5VT99 294 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 CYP4F22Q6NT55 531 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 GSTA5Q7RTV2 222 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 ECHDC2Q86YB7 292 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 OR5B17Q8NGF7 314 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 RBM41Q96IZ5 413 aaKnown RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 CFAP57Q96MR6 1250 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 PORCNQ9H237 461 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 DRG1Q9Y295 367 aaKnown RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 A0A0B4J269 797 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 PI4K2BG5E9Z4 385 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 PRPF4O43172 522 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 PTPN7P35236 360 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 GJC1P36383 396 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 SKIV2L2P42285 1042 aaKnown RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 MCL1Q07820 350 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 ADCY1Q08828 1119 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 NR1H3Q13133 447 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 TMED2Q15363 201 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 SLFN12LQ6IEE8 588 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 MFSD7Q6UXD7 560 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 GPATCH11Q8N954 259 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 ZNF606Q8WXB4 792 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 TMEM143Q96AN5 459 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 L3MBTL3Q96JM7 780 aaPredicted RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 DHX33Q9H6R0 707 aaKnown RBP13.49□□□□□ -0.25
CTPS1-202ENST00000372621 SAYSD1Q9NPB0 183 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
CTPS1-202ENST00000372621 LDHAP00338 332 aaKnown RBP13.48□□□□□ -0.25
CTPS1-202ENST00000372621 KRT16P08779 473 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 SUPT20HL2P0C7V6 817 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 KCNA3P22001 575 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 ARL2P36404 184 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 NAMPTP43490 491 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 IL9RQ01113 521 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 SP4Q02446 784 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 OASLQ15646 514 aaKnown RBP13.48□□□□□ -0.25
CTPS1-202ENST00000372621 SUPT20HL1Q3ZLR7 823 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 RGS9BPQ6ZS82 235 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 TBC1D31Q96DN5 1066 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 CDHR1Q96JP9 859 aa13.48□□□□□ -0.25
CTPS1-202ENST00000372621 TTC25Q96NG3 672 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms