RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 KLK14Q9P0G3 267 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 GIT1Q9Y2X7 761 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 PCDHGC5Q9Y5F6 944 aa17.18■□□□□ 0.34
C9orf78-201ENST00000372447 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 EXTL3O43909 919 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ZRANB2O95218 330 aaKnown RBP eCLIP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 BRD3Q15059 726 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 KYAT1Q16773 422 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 SLC10A6Q3KNW5 377 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 USP37Q86T82 979 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ARHGEF19Q8IW93 802 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 HELQQ8TDG4 1101 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 CCDC127Q96BQ5 260 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ZFP42Q96MM3 310 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 GAD1Q99259 594 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 RHOXF2Q9BQY4 288 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 TLR10Q9BXR5 811 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 RAB21Q9UL25 225 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 INTUQ9ULD6 942 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 PTPRSQ13332 1948 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 CCDC151A5D8V7 595 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ARL5CA6NH57 179 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 LRRIQ3A6PVS8 624 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 PDE2AO00408 941 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 FOXN3O00409 490 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 NCK2O43639 380 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 CXCL8P10145 99 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 MLH1P40692 756 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 YARSP54577 528 aaKnown RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ENPEPQ07075 957 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 CYP24A1Q07973 514 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 PRPF38BQ5VTL8 546 aaKnown RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 KRT39Q6A163 491 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 CC2D1AQ6P1N0 951 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ALKAL1Q6UXT8 129 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 GSTCDQ8NEC7 633 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 OLIG1Q8TAK6 271 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 LNX1Q8TBB1 728 aaPredicted RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 COG1Q8WTW3 980 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 CASD1Q96PB1 797 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 SYT11Q9BT88 431 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 ZBED2Q9BTP6 218 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 RC3H2Q9HBD1 1191 aaKnown RBP17.17■□□□□ 0.34
C9orf78-201ENST00000372447 TMEM8AQ9HCN3 771 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 MIOSQ9NXC5 875 aa17.17■□□□□ 0.34
C9orf78-201ENST00000372447 HOXA2O43364 376 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 LRRN2O75325 713 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 H2AFZP0C0S5 128 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 GTF2H1P32780 548 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 RABGGTBP53611 331 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 HTRA4P83105 476 aaPredicted RBP17.16■□□□□ 0.34
C9orf78-201ENST00000372447 IFI16Q16666 785 aaKnown RBP17.16■□□□□ 0.34
C9orf78-201ENST00000372447 GLB1LQ6UWU2 654 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 H2AFVQ71UI9 128 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 PNKPQ96T60 521 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 YME1L1Q96TA2 773 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 RPF1Q9H9Y2 349 aaKnown RBP17.16■□□□□ 0.34
C9orf78-201ENST00000372447 INPP5FQ9Y2H2 1132 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 COQ4Q9Y3A0 265 aa17.16■□□□□ 0.34
C9orf78-201ENST00000372447 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 GRID2IPA4D2P6 1211 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 TBKBP1A7MCY6 615 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 TUBBP07437 444 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 XKR4Q5GH76 650 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 ZNF572Q7Z3I7 529 aaPredicted RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 DNAAF5Q86Y56 855 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 GLYCTKQ8IVS8 523 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 ABI1Q8IZP0 508 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 SNX27Q96L92 541 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 POP1Q99575 1024 aaKnown RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 RAD9AQ99638 391 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 KIAA1586Q9HCI6 787 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 ARFGAP3Q9NP61 516 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 TOPORSQ9NS56 1045 aaPredicted RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 INSL6Q9Y581 213 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 ZNF233A6NK53 670 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 LACTBL1A8MY62 500 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 TULP1O00294 542 aaPredicted RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 INPPL1O15357 1258 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 TLL1O43897 1013 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 SEC31AO94979 1220 aaKnown RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 WNT7BP56706 349 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 NOMO2Q5JPE7 1267 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 MEI1Q5TIA1 1274 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 SEMA4DQ92854 862 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 FAM212AQ96EL1 285 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 PLEKHA5Q9HAU0 1116 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 FAM53CQ9NYF3 392 aa17.15■□□□□ 0.34
C9orf78-201ENST00000372447 RBAKQ9NYW8 714 aaPredicted RBP17.15■□□□□ 0.34
C9orf78-201ENST00000372447 PTGESO14684 152 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 FTCDO95954 541 aa17.14■□□□□ 0.33
C9orf78-201ENST00000372447 POMCP01189 267 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms