RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 USP46P62068 366 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 JAG1P78504 1218 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 FMO1Q01740 532 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 CDR2Q01850 454 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 NR1H3Q13133 447 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SF3B3Q15393 1217 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 C1orf220Q5T0J3 134 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 LIAT1Q6ZQX7 453 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 LMNTD2Q8IXW0 634 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 ZBED8Q8IZ13 594 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 EPS8L1Q8TE68 723 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 C7orf43Q8WVR3 580 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SERPINB12Q96P63 405 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 TRIM56Q9BRZ2 755 aaKnown RBP5.74□□□□□ -1.49
ATG4A-204ENST00000372246 PRDM9Q9NQV7 894 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC4BQ9NT99 713 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 RHBDL2Q9NX52 303 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 SERPINA10Q9UK55 444 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 AK5Q9Y6K8 562 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 BPTFQ12830 3046 aa5.74□□□□□ -1.49
ATG4A-204ENST00000372246 DDX60LQ5H9U9 1706 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 CYP3A7-CYP3A51PA0A087WV96 503 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 H0YIN7 160 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 EDF1O60869 148 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 SLITRK3O94933 977 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 LUC7L3O95232 432 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 EEF2P13639 858 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 KRT5P13647 590 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 CD1EP15812 388 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GSTT1P30711 240 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GMPRP36959 345 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GRIA2P42262 883 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MAGEA4P43358 317 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 CCNG1P51959 295 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 DRG2P55039 364 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 RTP1P59025 263 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 DYNLT1P63172 113 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GTF2IP78347 998 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GPSM2P81274 684 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 IL9RQ01113 521 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ROR2Q01974 943 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 KDSRQ06136 332 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MCL1Q07820 350 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 STRN3Q13033 797 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TTLL12Q14166 644 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MSS51Q4VC12 460 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 HYIQ5T013 277 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 RASIP1Q5U651 963 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 CES4AQ5XG92 561 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 LPCAT4Q643R3 524 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 SPOPLQ6IQ16 392 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 BTNL9Q6UXG8 535 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 IZUMO2Q6UXV1 221 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 LRRC74BQ6ZQY2 392 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TRABD2AQ86V40 505 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 CBWD2Q8IUF1 395 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.73□□□□□ -1.498e-6■■■■■ 46.4
ATG4A-204ENST00000372246 TMEM130Q8N3G9 435 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF75CPQ92670 426 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 NMD3Q96D46 503 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 IFT43Q96FT9 208 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 SNF8Q96H20 258 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 RAB3IPQ96QF0 476 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 NAP1L3Q99457 506 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GORASP1Q9BQQ3 440 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 WDR18Q9BV38 432 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 PREBQ9HCU5 417 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TXLNGQ9NUQ3 528 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 NOCTQ9UK39 431 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 FZD1Q9UP38 647 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 AFG3L2Q9Y4W6 797 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TCRBV7S3A2A0A539 114 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ESYT2A0FGR8 921 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MAPK13O15264 365 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MAGEB3O15480 346 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GYG2O15488 501 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 RNASEH1O60930 286 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 UFL1O94874 794 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 PGM3O95394 542 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ENO1P06733 434 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ADRB2P07550 413 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 F7P08709 466 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 FDX1P10109 184 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ATF7P17544 494 aaPredicted RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 RPL13P26373 211 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MARK3P27448 753 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 RPA1P27694 616 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ZNF76P36508 570 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 IRX4P78413 519 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 GUCA2AQ02747 115 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 BFSP1Q12934 665 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 KIF22Q14807 665 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 HHATQ5VTY9 493 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ANKRD22Q5VYY1 191 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 MTHFD1LQ6UB35 978 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 ARHGEF18Q6ZSZ5 1173 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TRMT10CQ7L0Y3 403 aaKnown RBP5.73□□□□□ -1.49
ATG4A-204ENST00000372246 TREML1Q86YW5 311 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 FAM178BQ8IXR5 827 aa5.73□□□□□ -1.49
ATG4A-204ENST00000372246 DAW1Q8N136 415 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms