RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ASAP3Q8TDY4 903 aa15.05■□□□□ -0
LDB3-204ENST00000372066 TAS1R2Q8TE23 839 aa15.05■□□□□ -0
LDB3-204ENST00000372066 WHAMMQ8TF30 809 aa15.05■□□□□ -0
LDB3-204ENST00000372066 TRIM11Q96F44 468 aa15.05■□□□□ -0
LDB3-204ENST00000372066 PCYT2Q99447 389 aa15.05■□□□□ -0
LDB3-204ENST00000372066 KRT12Q99456 494 aa15.05■□□□□ -0
LDB3-204ENST00000372066 UVRAGQ9P2Y5 699 aa15.05■□□□□ -0
LDB3-204ENST00000372066 GTF3C4Q9UKN8 822 aa15.05■□□□□ -0
LDB3-204ENST00000372066 ABHD14A-ACY1A0A1B0GW23 586 aa15.04■□□□□ -0
LDB3-204ENST00000372066 LCHNA4D1U4 455 aa15.04■□□□□ -0
LDB3-204ENST00000372066 DDX3YO15523 660 aaKnown RBP15.04■□□□□ -0
LDB3-204ENST00000372066 PPFIA4O75335 1185 aa15.04■□□□□ -0
LDB3-204ENST00000372066 CXCL10P02778 98 aa15.04■□□□□ -0
LDB3-204ENST00000372066 MYBL2P10244 700 aa15.04■□□□□ -0
LDB3-204ENST00000372066 CYP11B1P15538 503 aa15.04■□□□□ -0
LDB3-204ENST00000372066 CHRNB2P17787 502 aa15.04■□□□□ -0
LDB3-204ENST00000372066 TCF7P36402 384 aaPredicted RBP15.04■□□□□ -0
LDB3-204ENST00000372066 DNA2P51530 1060 aa15.04■□□□□ -0
LDB3-204ENST00000372066 DEFB103AP81534 67 aa15.04■□□□□ -0
LDB3-204ENST00000372066 ZNF200P98182 395 aaPredicted RBP15.04■□□□□ -0
LDB3-204ENST00000372066 CUL1Q13616 776 aa15.04■□□□□ -0
LDB3-204ENST00000372066 ALS2CLQ60I27 953 aa15.04■□□□□ -0
LDB3-204ENST00000372066 PLPPR4Q7Z2D5 763 aa15.04■□□□□ -0
LDB3-204ENST00000372066 SPRED2Q7Z698 418 aa15.04■□□□□ -0
LDB3-204ENST00000372066 MREGQ8N565 214 aa15.04■□□□□ -0
LDB3-204ENST00000372066 UBL4BQ8N7F7 174 aa15.04■□□□□ -0
LDB3-204ENST00000372066 CCDC26Q8TAB7 109 aa15.04■□□□□ -0
LDB3-204ENST00000372066 HDAC7Q8WUI4 952 aa15.04■□□□□ -0
LDB3-204ENST00000372066 TMEM143Q96AN5 459 aa15.04■□□□□ -0
LDB3-204ENST00000372066 ARHGEF26Q96DR7 871 aa15.04■□□□□ -0
LDB3-204ENST00000372066 SPATA33Q96N06 139 aa15.04■□□□□ -0
LDB3-204ENST00000372066 CGRRF1Q99675 332 aa15.04■□□□□ -0
LDB3-204ENST00000372066 C2orf40Q9H1Z8 148 aa15.04■□□□□ -0
LDB3-204ENST00000372066 OSGEPQ9NPF4 335 aa15.04■□□□□ -0
LDB3-204ENST00000372066 TAS2R14Q9NYV8 317 aa15.04■□□□□ -0
LDB3-204ENST00000372066 CTTNBP2NLQ9P2B4 639 aa15.04■□□□□ -0
LDB3-204ENST00000372066 COG5Q9UP83 839 aa15.04■□□□□ -0
LDB3-204ENST00000372066 TELO2Q9Y4R8 837 aa15.04■□□□□ -0
LDB3-204ENST00000372066 A0A0B4J269 797 aa15.03■□□□□ -0
LDB3-204ENST00000372066 GOLGA6L10A0A0M3HER8 536 aa15.03■□□□□ -0
LDB3-204ENST00000372066 HAS3O00219 553 aa15.03■□□□□ -0
LDB3-204ENST00000372066 ZMYND10O75800 440 aa15.03■□□□□ -0
LDB3-204ENST00000372066 F2P00734 622 aa15.03■□□□□ -0
LDB3-204ENST00000372066 DLATP10515 647 aaKnown RBP15.03■□□□□ -0
LDB3-204ENST00000372066 SLC7A5Q01650 507 aa15.03■□□□□ -0
LDB3-204ENST00000372066 FMO1Q01740 532 aa15.03■□□□□ -0
LDB3-204ENST00000372066 IKBKEQ14164 716 aa15.03■□□□□ -0
LDB3-204ENST00000372066 MXD4Q14582 209 aaPredicted RBP15.03■□□□□ -0
LDB3-204ENST00000372066 SURF1Q15526 300 aa15.03■□□□□ -0
LDB3-204ENST00000372066 CELF3Q5SZQ8 465 aaKnown RBP15.03■□□□□ -0
LDB3-204ENST00000372066 ZNF618Q5T7W0 954 aa15.03■□□□□ -0
LDB3-204ENST00000372066 SND1Q7KZF4 910 aaKnown RBP eCLIP15.03■□□□□ -0
LDB3-204ENST00000372066 ZNF771Q7L3S4 317 aaPredicted RBP15.03■□□□□ -0
LDB3-204ENST00000372066 MAATS1Q7Z4T9 603 aa15.03■□□□□ -0
LDB3-204ENST00000372066 KAT5Q92993 513 aa15.03■□□□□ -0
LDB3-204ENST00000372066 PRDM4Q9UKN5 801 aa15.03■□□□□ -0
LDB3-204ENST00000372066 MUC3AQ02505 3323 aa15.03■□□□□ -0
LDB3-204ENST00000372066 GOLGA6BA6NDN3 693 aa15.02■□□□□ -0
LDB3-204ENST00000372066 BHMG1C9JSJ3 638 aaPredicted RBP15.02■□□□□ -0
LDB3-204ENST00000372066 TULP1O00294 542 aaPredicted RBP15.02■□□□□ -0
LDB3-204ENST00000372066 KRIT1O00522 736 aa15.02■□□□□ -0
LDB3-204ENST00000372066 CYP26A1O43174 497 aa15.02■□□□□ -0
LDB3-204ENST00000372066 CYP1A2P05177 515 aa15.02■□□□□ -0
LDB3-204ENST00000372066 MYBL1P10243 752 aa15.02■□□□□ -0
LDB3-204ENST00000372066 TBXAS1P24557 533 aaPredicted RBP15.02■□□□□ -0
LDB3-204ENST00000372066 CAPSQ13938 189 aa15.02■□□□□ -0
LDB3-204ENST00000372066 TCTN1Q2MV58 587 aa15.02■□□□□ -0
LDB3-204ENST00000372066 HSDL1Q3SXM5 330 aa15.02■□□□□ -0
LDB3-204ENST00000372066 CDCA2Q69YH5 1023 aaPredicted RBP15.02■□□□□ -0
LDB3-204ENST00000372066 FAM117BQ6P1L5 589 aa15.02■□□□□ -0
LDB3-204ENST00000372066 TRIM72Q6ZMU5 477 aa15.02■□□□□ -0
LDB3-204ENST00000372066 PALB2Q86YC2 1186 aa15.02■□□□□ -0
LDB3-204ENST00000372066 ZBTB8OSQ8IWT0 167 aa15.02■□□□□ -0
LDB3-204ENST00000372066 HLA-CQ95604 372 aa15.02■□□□□ -0
LDB3-204ENST00000372066 RAD9AQ99638 391 aa15.02■□□□□ -0
LDB3-204ENST00000372066 MSTO1Q9BUK6 570 aa15.02■□□□□ -0
LDB3-204ENST00000372066 EPB41L5Q9HCM4 733 aa15.02■□□□□ -0
LDB3-204ENST00000372066 TOPORSQ9NS56 1045 aaPredicted RBP15.02■□□□□ -0
LDB3-204ENST00000372066 RBAKQ9NYW8 714 aaPredicted RBP15.02■□□□□ -0
LDB3-204ENST00000372066 NOP56O00567 594 aaKnown RBP15.02□□□□□ -0.01
LDB3-204ENST00000372066 RAD51CO43502 376 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 OPA1O60313 960 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 LPXNO60711 386 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 EFCAB14O75071 495 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 GJB5O95377 273 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 HLA-DRAP01903 254 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 C4BPAP04003 597 aaKnown RBP15.02□□□□□ -0.01
LDB3-204ENST00000372066 GLI1P08151 1106 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 TNNI1P19237 187 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 PIK3CAP42336 1068 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 GUCY2DQ02846 1103 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 TRIM71Q2Q1W2 868 aaKnown RBP15.02□□□□□ -0.01
LDB3-204ENST00000372066 ACAD10Q6JQN1 1059 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 SLC47A2Q86VL8 602 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 DNAAF5Q86Y56 855 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 GSPT2Q8IYD1 628 aaKnown RBP15.02□□□□□ -0.01
LDB3-204ENST00000372066 ATP8B4Q8TF62 1192 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 DDX1Q92499 740 aaKnown RBP15.02□□□□□ -0.01
LDB3-204ENST00000372066 WNT8BQ93098 351 aa15.02□□□□□ -0.01
LDB3-204ENST00000372066 POP1Q99575 1024 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms