RNA–Protein interactions for RNA: ENST00000371974.7

SURF1-201, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SURF1, Length 1,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-201ENST00000371974 PTPRJQ12913 1337 aa27.32■■□□□ 1.96
SURF1-201ENST00000371974 MTCL1Q9Y4B5 1905 aaKnown RBP27.31■■□□□ 1.96
SURF1-201ENST00000371974 OR6C75A6NL08 312 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 ABLIM3O94929 683 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 PAPLNO95428 1278 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 CYP11A1P05108 521 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 HNRNPA1P09651 372 aaKnown RBP eCLIP27.31■■□□□ 1.96
SURF1-201ENST00000371974 RPL13P26373 211 aaKnown RBP27.31■■□□□ 1.96
SURF1-201ENST00000371974 MYO1EQ12965 1108 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 NFIL3Q16649 462 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 SMYD4Q8IYR2 804 aaPredicted RBP27.31■■□□□ 1.96
SURF1-201ENST00000371974 CXorf38Q8TB03 319 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 SMG7Q92540 1137 aaKnown RBP27.31■■□□□ 1.96
SURF1-201ENST00000371974 BORCS6Q96GS4 357 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 FAM84AQ96KN4 292 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 PRKD2Q9BZL6 878 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 SIX4Q9UIU6 781 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 NR2E1Q9Y466 385 aa27.31■■□□□ 1.96
SURF1-201ENST00000371974 SCN1AP35498 2009 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 WDR27A2RRH5 827 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 CPB1P15086 417 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 ATF2P15336 505 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 BFSP1Q12934 665 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 CEP135Q66GS9 1140 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 TRAPPC11Q7Z392 1133 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 SLC7A14Q8TBB6 771 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 MAFFQ9ULX9 164 aa27.3■■□□□ 1.96
SURF1-201ENST00000371974 LOC730098B7Z3J9 87 aa27.29■■□□□ 1.96
SURF1-201ENST00000371974 NR2F2P24468 414 aa27.29■■□□□ 1.96
SURF1-201ENST00000371974 HOXA9P31269 272 aa27.29■■□□□ 1.96
SURF1-201ENST00000371974 COBLL1Q53SF7 1204 aa27.29■■□□□ 1.96
SURF1-201ENST00000371974 THEM5Q8N1Q8 247 aa27.29■■□□□ 1.96
SURF1-201ENST00000371974 ZNF707Q96C28 371 aaPredicted RBP27.29■■□□□ 1.96
SURF1-201ENST00000371974 TSHZ2Q9NRE2 1034 aa27.29■■□□□ 1.96
SURF1-201ENST00000371974 BDP1A6H8Y1 2624 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 PRRG1O14668 218 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 HUS1O60921 280 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 PRCPP42785 496 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 CASP4P49662 377 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 AP3M2P53677 418 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 CLEC17AQ6ZS10 378 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 FEZF2Q8TBJ5 459 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 PARD3BQ8TEW8 1205 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 GDAP2Q9NXN4 497 aa27.28■■□□□ 1.96
SURF1-201ENST00000371974 AFF4Q9UHB7 1163 aaKnown RBP27.28■■□□□ 1.96
SURF1-201ENST00000371974 MAPK13O15264 365 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 XYLBO75191 536 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 ADAM9Q13443 819 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 EDRF1Q3B7T1 1238 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 WSCD1Q658N2 575 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 TCEAL8Q8IYN2 117 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 HPDLQ96IR7 371 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 CYP4F11Q9HBI6 524 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 WDR6Q9NNW5 1121 aaKnown RBP27.27■■□□□ 1.96
SURF1-201ENST00000371974 SNX9Q9Y5X1 595 aa27.27■■□□□ 1.96
SURF1-201ENST00000371974 ADCY1Q08828 1119 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 STIM1Q13586 685 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 ZCWPW2Q504Y3 356 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 TMC2Q8TDI7 906 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 ZNF516Q92618 1163 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 TSG101Q99816 390 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 GZF1Q9H116 711 aaPredicted RBP27.26■■□□□ 1.95
SURF1-201ENST00000371974 MAN1B1Q9UKM7 699 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 USTQ9Y2C2 406 aa27.26■■□□□ 1.95
SURF1-201ENST00000371974 CCL16O15467 120 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 PHACTR2O75167 634 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 POU2F2P09086 479 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 SP100P23497 879 aaPredicted RBP27.25■■□□□ 1.95
SURF1-201ENST00000371974 PSMC2P35998 433 aaKnown RBP27.25■■□□□ 1.95
SURF1-201ENST00000371974 CLDN10P78369 228 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 GPR17Q13304 367 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 TRPC3Q13507 836 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 SCARA3Q6AZY7 606 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 CENPPQ6IPU0 288 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 RNF19BQ6ZMZ0 732 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 ADSSL1Q8N142 457 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 TMEM86AQ8N2M4 240 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 PLEKHO2Q8TD55 490 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 POLIQ9UNA4 740 aa27.25■■□□□ 1.95
SURF1-201ENST00000371974 CLUHO75153 1309 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 LRRIQ3A6PVS8 624 aaPredicted RBP27.24■■□□□ 1.95
SURF1-201ENST00000371974 LRG1P02750 347 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 OR4Q2P0C623 313 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 PPP1R2P41236 205 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 BIRC3Q13489 604 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 ISM2Q6H9L7 571 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 INTS8Q75QN2 995 aaKnown RBP27.24■■□□□ 1.95
SURF1-201ENST00000371974 OTOP3Q7RTS5 596 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 RNF135Q8IUD6 432 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 PDCL2Q8N4E4 241 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 TOP6BLQ8N6T0 577 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 ACSF2Q96CM8 615 aaPredicted RBP27.24■■□□□ 1.95
SURF1-201ENST00000371974 GBP4Q96PP9 640 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 L1RE1Q9UN81 338 aa27.24■■□□□ 1.95
SURF1-201ENST00000371974 CETN3O15182 167 aa27.23■■□□□ 1.95
SURF1-201ENST00000371974 AKAP3O75969 853 aa27.23■■□□□ 1.95
SURF1-201ENST00000371974 SEC24AO95486 1093 aa27.23■■□□□ 1.95
SURF1-201ENST00000371974 CST3P01034 146 aaPredicted RBP27.23■■□□□ 1.95
SURF1-201ENST00000371974 KRT13P13646 458 aa27.23■■□□□ 1.95
SURF1-201ENST00000371974 DPH6Q7L8W6 267 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms