RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 SIK3Q9Y2K2 1263 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
PTPN1-201ENST00000371621 LINC00854A0A1B0GVQ3 168 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 TNFAIP8O95379 198 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 NUDT17P0C025 328 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 NUP107P57740 925 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 SLC45A4Q5BKX6 768 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 TMEM53Q6P2H8 277 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 SCYL2Q6P3W7 929 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 RAD54LQ92698 747 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 ATXN7L3BQ96GX2 97 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 C10orf88Q9H8K7 445 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 CD163L1Q9NR16 1453 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 ANKRD33BA6NCL7 494 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 AKAP10O43572 662 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 COQ9O75208 318 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 WFS1O76024 890 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 ASLP04424 464 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 CHKAP35790 457 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 SKIV2L2P42285 1042 aaKnown RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 INHBEP58166 350 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 MRPS22P82650 360 aaKnown RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 RPS6KA2Q15349 733 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 NEDD8Q15843 81 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 CENPPQ6IPU0 288 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 TMEM214Q6NUQ4 689 aaKnown RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 CCDC24Q8N4L8 307 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 DIS3LQ8TF46 1054 aaKnown RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 TTC25Q96NG3 672 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 WNT8AQ9H1J5 351 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 SEMA6AQ9H2E6 1030 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 COPS7BQ9H9Q2 264 aaPredicted RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 EPB41L4AQ9HCS5 686 aaPredicted RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 TUBA8Q9NY65 449 aaPredicted RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 WDR37Q9Y2I8 494 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 SNX13Q9Y5W8 968 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 MROH7Q68CQ1 1323 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 COL3A1P02461 1466 aaPredicted RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 IPO5O00410 1097 aaKnown RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 PIK3R2O00459 728 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 MGEA5O60502 916 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 FKBP6O75344 327 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 STX3Q13277 289 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 USP13Q92995 863 aaPredicted RBP12.36□□□□□ -0.43
PTPN1-201ENST00000371621 C7orf25Q9BPX7 421 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 C11orf70Q9BRQ4 267 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 TIPINQ9BVW5 301 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 PSTPIP2Q9H939 334 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 KBTBD4Q9NVX7 518 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
PTPN1-201ENST00000371621 KDM3AQ9Y4C1 1321 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 A8MXQ7 604 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 FOXD2O60548 495 aaPredicted RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 KLHL41O60662 606 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 FGFR3P22607 806 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 SLC16A2P36021 539 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 STAT3P40763 770 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 NUDT2P50583 147 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 CSE1LP55060 971 aaKnown RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 RALGDSQ12967 914 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 PRPSAP1Q14558 356 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 LAYNQ6UX15 382 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 TTC7BQ86TV6 843 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 CDR2LQ86X02 465 aaPredicted RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 MCUQ8NE86 351 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 OXNAD1Q96HP4 312 aaPredicted RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 FHDC1Q9C0D6 1143 aaPredicted RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 VPS11Q9H270 941 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 KRT82Q9NSB4 513 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 SSX2IPQ9Y2D8 614 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 OVOS2A0A0G2JMS6 1433 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 K7ENM7 598 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 CAPN15O75808 1086 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 KNOP1Q1ED39 458 aaKnown RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 ALYREFQ86V81 257 aaKnown RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 C1orf131Q8NDD1 294 aaKnown RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 RFWD2Q8NHY2 731 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 PCDH12Q9NPG4 1184 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 NINJ2Q9NZG7 142 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 STARD13Q9Y3M8 1113 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 TBX22Q9Y458 520 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 DLGAP3O95886 979 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 LDHBP07195 334 aaKnown RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 RALAP11233 206 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 HMOX2P30519 316 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 RFX5P48382 616 aaPredicted RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 HPCAP84074 193 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 PTK7Q13308 1070 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 PPP6R3Q5H9R7 873 aaPredicted RBP12.35□□□□□ -0.43
PTPN1-201ENST00000371621 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 ZCCHC23Q6ZST2 131 aa12.35□□□□□ -0.43
PTPN1-201ENST00000371621 FASTKD5Q7L8L6 764 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms