RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 KLHL5Q96PQ7 755 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 THAP9Q9H5L6 903 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 GDAP2Q9NXN4 497 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 FNIP2Q9P278 1114 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 PER2O15055 1255 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 NCK2O43639 380 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 VNN1O95497 513 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 STAU1O95793 577 aaKnown RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 PTMAP06454 111 aaKnown RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 TYMPP19971 482 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 MXI1P50539 228 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 MYL6P60660 151 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 HYAL1Q12794 435 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 KRT39Q6A163 491 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 FAM114A1Q8IWE2 563 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 CNOT6LQ96LI5 555 aaKnown RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 IGFLR1Q9H665 355 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 DSEQ9UL01 958 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
PFDN4-201ENST00000371419 BACE2Q9Y5Z0 518 aa17.12■□□□□ 0.33
PFDN4-201ENST00000371419 ESPNB1AK53 854 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 H7C4K7 107 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 TEX28O15482 410 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 HUS1O60921 280 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 CLASP2O75122 1294 aaKnown RBP17.11■□□□□ 0.33
PFDN4-201ENST00000371419 OAZ2O95190 189 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 HLA-DRAP01903 254 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 CYP11A1P05108 521 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 ADH1AP07327 375 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 KLRC2P26717 231 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 NDUFV1P49821 464 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 TPM4P67936 248 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 YWHAHQ04917 246 aaPredicted RBP17.11■□□□□ 0.33
PFDN4-201ENST00000371419 MRPL58Q14197 206 aaKnown RBP17.11■□□□□ 0.33
PFDN4-201ENST00000371419 IRF2BP1Q8IU81 584 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 XYLT2Q9H1B5 865 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 VRTNQ9H8Y1 702 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 SNX9Q9Y5X1 595 aa17.11■□□□□ 0.33
PFDN4-201ENST00000371419 REV3LO60673 3130 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 EYSQ5T1H1 3165 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 TPM3P06753 285 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 RPL17P18621 184 aaKnown RBP17.1■□□□□ 0.33
PFDN4-201ENST00000371419 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.33
PFDN4-201ENST00000371419 SGSM1Q2NKQ1 1148 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 ZNF699Q32M78 642 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 OVOS1Q6IE37 1185 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 ZNF280DQ6N043 979 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 ZSCAN30Q86W11 494 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 PPFIBP1Q86W92 1011 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 METTL23Q86XA0 190 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 CREBRFQ8IUR6 639 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 EFHBQ8N7U6 833 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 TAS1R2Q8TE23 839 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 TAF4BQ92750 862 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 CLSTN3Q9BQT9 956 aa17.1■□□□□ 0.33
PFDN4-201ENST00000371419 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
PFDN4-201ENST00000371419 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
PFDN4-201ENST00000371419 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 CLSTN1O94985 981 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 TNNC1P63316 161 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 MYL5Q02045 173 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 SKIV2LQ15477 1246 aaKnown RBP17.09■□□□□ 0.33
PFDN4-201ENST00000371419 WDR72Q3MJ13 1102 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 CTXN3Q4LDR2 81 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 WSCD1Q658N2 575 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 SARM1Q6SZW1 724 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 DPH6Q7L8W6 267 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 TOP6BLQ8N6T0 577 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 FBXL13Q8NEE6 735 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 OXCT2Q9BYC2 517 aaPredicted RBP17.09■□□□□ 0.33
PFDN4-201ENST00000371419 IMPG2Q9BZV3 1241 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 SAMSN1Q9NSI8 373 aaKnown RBP17.09■□□□□ 0.33
PFDN4-201ENST00000371419 L1RE1Q9UN81 338 aa17.09■□□□□ 0.33
PFDN4-201ENST00000371419 TBC1D4O60343 1298 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 N4BP1O75113 896 aaKnown RBP17.08■□□□□ 0.32
PFDN4-201ENST00000371419 ASS1P00966 412 aaKnown RBP17.08■□□□□ 0.32
PFDN4-201ENST00000371419 OR1D2P34982 312 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 MTIF2P46199 727 aaKnown RBP17.08■□□□□ 0.32
PFDN4-201ENST00000371419 FMO5P49326 533 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 KCNH2Q12809 1159 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 COL19A1Q14993 1142 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 ZNF667Q5HYK9 610 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 SLC8B1Q6J4K2 584 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 RSPO2Q6UXX9 243 aaPredicted RBP17.08■□□□□ 0.32
PFDN4-201ENST00000371419 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
PFDN4-201ENST00000371419 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 TMEM86AQ8N2M4 240 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 PDCL2Q8N4E4 241 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 SPATA18Q8TC71 538 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms