RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 HID1Q8IV36 788 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TRIML1Q8N9V2 468 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 FAM184AQ8NB25 1140 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ZBTB44Q8NCP5 570 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 Q8NFD4 153 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TRAPPC12Q8WVT3 735 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CNDP2Q96KP4 475 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 ACO2Q99798 780 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 NUDT16L1Q9BRJ7 211 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 NACA2Q9H009 215 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 IFT22Q9H7X7 185 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TBCCD1Q9NVR7 557 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SUSD2Q9UGT4 822 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 PLXNA3P51805 1871 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 KIF26AQ9ULI4 1882 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 H0YIN7 160 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 IKBKBO14920 756 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 UFL1O94874 794 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 BAG3O95817 575 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CST3P01034 146 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 THEGLP0DJG4 465 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 BCRP11274 1271 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SCG2P13521 617 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ATP4AP20648 1035 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TBXAS1P24557 533 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 RGS19P49795 217 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SLC12A3P55017 1021 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 HTD2P86397 168 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ZSCAN26Q16670 478 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SHC4Q6S5L8 630 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ZYG11AQ6WRX3 759 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 MEX3BQ6ZN04 569 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 FGD2Q7Z6J4 655 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 LRRTM4Q86VH4 590 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 AVL9Q8NBF6 648 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SCG3Q8WXD2 468 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 BRI3BPQ8WY22 251 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 BRF1Q92994 677 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 AIDAQ96BJ3 306 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CEP295NLQ96MC4 621 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TMEM237Q96Q45 408 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TMEM47Q9BQJ4 181 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 NTMT1Q9BV86 223 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 COLEC11Q9BWP8 271 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 GTPBP4Q9BZE4 634 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 ATP13A1Q9HD20 1204 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 DDX19AQ9NUU7 478 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 JAG2Q9Y219 1238 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 PCDHA2Q9Y5H9 948 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 PTPRDP23468 1912 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CCDC69A6NI79 296 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 NMT2O60551 498 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 GUCY2CP25092 1073 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 PSMA4P25789 261 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 ARCN1P48444 511 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 GNAQP50148 359 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 MLLT1Q03111 559 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 ERV3-1Q14264 604 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SART3Q15020 963 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 ADIPOQQ15848 244 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 FAM182BQ5T319 152 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 MYLK4Q86YV6 388 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 NOSTRINQ8IVI9 506 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TTLL6Q8N841 843 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SUN5Q8TC36 379 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 PHOSPHO2Q8TCD6 241 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SPPL3Q8TCT6 385 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 BCAS4Q8TDM0 211 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 KCNG4Q8TDN1 519 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 LRRC15Q8TF66 581 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ATP6V1E2Q96A05 226 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 MED15Q96RN5 788 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 UPF3BQ9BZI7 483 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 ACAD9Q9H845 621 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CRLF2Q9HC73 371 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 POLMQ9NP87 494 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 FOXD3Q9UJU5 478 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 CNOT11Q9UKZ1 510 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 PCDHA6Q9UN73 950 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 APOBEC2Q9Y235 224 aaKnown RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 CNPY2Q9Y2B0 182 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 PCDHA8Q9Y5H6 950 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SESN1Q9Y6P5 492 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 PRR5-ARHGAP8B1AHC4 643 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 GADD45BO75293 160 aaPredicted RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 CILPO75339 1184 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 LYPLA2O95372 231 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 POLBP06746 335 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 KRT10P13645 584 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 SELPP16109 830 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 DPEP1P16444 411 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 TNNT3P45378 269 aaPredicted RBP4.22□□□□□ -1.73
MCF2-203ENST00000370576 GPR3P46089 330 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 LRP8Q14114 963 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 KCNB1Q14721 858 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ARHGAP29Q52LW3 1261 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 BOLA3Q53S33 107 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 ZNF783Q6ZMS7 281 aa4.22□□□□□ -1.73
MCF2-203ENST00000370576 NUDT18Q6ZVK8 323 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms