RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 BRWD1Q9NSI6 2320 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 XIRP2A4UGR9 3374 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 H3BQ06 376 aaPredicted RBP15.95■□□□□ 0.14
COL9A1-204ENST00000370496 IKBKBO14920 756 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 CPB1P15086 417 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 MXI1P50539 228 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 ARPP19P56211 112 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 TNNC1P63316 161 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 NCOA4Q13772 614 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 CLUL1Q15846 466 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 STX1AQ16623 288 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 KLHL40Q2TBA0 621 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 ZNF699Q32M78 642 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 ZACNQ401N2 412 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 PALB2Q86YC2 1186 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 CLSTN3Q9BQT9 956 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 IMPG2Q9BZV3 1241 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 METTL14Q9HCE5 456 aaKnown RBP15.95■□□□□ 0.14
COL9A1-204ENST00000370496 MAN1C1Q9NR34 630 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 DPP7Q9UHL4 492 aa15.95■□□□□ 0.14
COL9A1-204ENST00000370496 ADAM12O43184 909 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 GNA14O95837 355 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 C4BPAP04003 597 aaKnown RBP15.94■□□□□ 0.14
COL9A1-204ENST00000370496 OR1D2P34982 312 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 MYL6P60660 151 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 TFF2Q03403 129 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 DLX2Q07687 328 aaPredicted RBP15.94■□□□□ 0.14
COL9A1-204ENST00000370496 AAK1Q2M2I8 961 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 C1orf220Q5T0J3 134 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 LIN9Q5TKA1 542 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 SCARA3Q6AZY7 606 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 SV2AQ7L0J3 742 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 ADGRF2Q8IZF7 708 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 SLC22A17Q8WUG5 538 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 SRRTQ9BXP5 876 aaKnown RBP15.94■□□□□ 0.14
COL9A1-204ENST00000370496 TMEM8AQ9HCN3 771 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 ANO10Q9NW15 660 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 FBXL5Q9UKA1 691 aa15.94■□□□□ 0.14
COL9A1-204ENST00000370496 MTCL1Q9Y4B5 1905 aaKnown RBP15.93■□□□□ 0.14
COL9A1-204ENST00000370496 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.93■□□□□ 0.14
COL9A1-204ENST00000370496 TGM5O43548 720 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 OAZ2O95190 189 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 CYP11A1P05108 521 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 CCDC192P0DO97 292 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 ATICP31939 592 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 GTF2H1P32780 548 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 LTBRP36941 435 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 ROR1Q01973 937 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 PPP3CAQ08209 521 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 KCNC3Q14003 757 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 WSCD1Q658N2 575 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 SLC8B1Q6J4K2 584 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 ANKRD54Q6NXT1 300 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 FRMD5Q7Z6J6 570 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL9A1-204ENST00000370496 TMEM86AQ8N2M4 240 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 PDCL2Q8N4E4 241 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 TOP6BLQ8N6T0 577 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 CCDC150Q8NCX0 1101 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 BORCS6Q96GS4 357 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 MMS19Q96T76 1030 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 OXCT2Q9BYC2 517 aaPredicted RBP15.93■□□□□ 0.14
COL9A1-204ENST00000370496 SFXN1Q9H9B4 322 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 GDAP2Q9NXN4 497 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 CLEC1BQ9P126 229 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 NXF1Q9UBU9 619 aaKnown RBP15.93■□□□□ 0.14
COL9A1-204ENST00000370496 CD207Q9UJ71 328 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 L1RE1Q9UN81 338 aa15.93■□□□□ 0.14
COL9A1-204ENST00000370496 SPTBN5Q9NRC6 3674 aaKnown RBP15.92■□□□□ 0.14
COL9A1-204ENST00000370496 OR6C75A6NL08 312 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 VNN1O95497 513 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 CST3P01034 146 aaPredicted RBP15.92■□□□□ 0.14
COL9A1-204ENST00000370496 HLA-DRAP01903 254 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 SPATA31D3P0C874 917 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 ERCC5P28715 1186 aaPredicted RBP15.92■□□□□ 0.14
COL9A1-204ENST00000370496 RAB33AQ14088 237 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 MRPL58Q14197 206 aaKnown RBP15.92■□□□□ 0.14
COL9A1-204ENST00000370496 WDR72Q3MJ13 1102 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 ZNF667Q5HYK9 610 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 KRT39Q6A163 491 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 RSPO2Q6UXX9 243 aaPredicted RBP15.92■□□□□ 0.14
COL9A1-204ENST00000370496 TMEM184AQ6ZMB5 413 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 SCARA5Q6ZMJ2 495 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 SPATA31D4Q6ZUB0 917 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 THEM5Q8N1Q8 247 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 CNOT6LQ96LI5 555 aaKnown RBP15.92■□□□□ 0.14
COL9A1-204ENST00000370496 APOL5Q9BWW9 433 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 XYLT2Q9H1B5 865 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 FBXW11Q9UKB1 542 aa15.92■□□□□ 0.14
COL9A1-204ENST00000370496 WDR27A2RRH5 827 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 STAU1O95793 577 aaKnown RBP15.91■□□□□ 0.14
COL9A1-204ENST00000370496 P4HA1P13674 534 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 HOXB8P17481 243 aaPredicted RBP15.91■□□□□ 0.14
COL9A1-204ENST00000370496 MRPS5P82675 430 aaKnown RBP15.91■□□□□ 0.14
COL9A1-204ENST00000370496 MYL7Q01449 175 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 LEXMQ3ZCV2 418 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 CT47A1Q5JQC4 288 aaPredicted RBP15.91■□□□□ 0.14
COL9A1-204ENST00000370496 C15orf39Q6ZRI6 1047 aa15.91■□□□□ 0.14
COL9A1-204ENST00000370496 CREBRFQ8IUR6 639 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms