RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 TYRO3Q06418 890 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 AAK1Q2M2I8 961 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 TDRD10Q5VZ19 366 aaKnown RBP14.79□□□□□ -0.04
SSR4-202ENST00000370085 PRSS55Q6UWB4 352 aaPredicted RBP14.79□□□□□ -0.04
SSR4-202ENST00000370085 SV2AQ7L0J3 742 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 ADGRD2Q7Z7M1 963 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 TOP6BLQ8N6T0 577 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 PLEKHO2Q8TD55 490 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 ZNF516Q92618 1163 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 BORCS6Q96GS4 357 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 MMS19Q96T76 1030 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 DNAI2Q9GZS0 605 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 DZANK1Q9NVP4 752 aa14.79□□□□□ -0.04
SSR4-202ENST00000370085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.79□□□□□ -0.04
SSR4-202ENST00000370085 OR6C75A6NL08 312 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 CLASP2O75122 1294 aaKnown RBP14.78□□□□□ -0.04
SSR4-202ENST00000370085 OAZ2O95190 189 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 TPM2P07951 284 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 LHX1P48742 406 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 MARSP56192 900 aaKnown RBP14.78□□□□□ -0.04
SSR4-202ENST00000370085 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
SSR4-202ENST00000370085 MYL7Q01449 175 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 WDR72Q3MJ13 1102 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 ZNF667Q5HYK9 610 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 WDR44Q5JSH3 913 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 FBXL13Q8NEE6 735 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 ANKRD20A12PQ8NF67 263 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 ENOX1Q8TC92 643 aaKnown RBP14.78□□□□□ -0.04
SSR4-202ENST00000370085 HDAC7Q8WUI4 952 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 GZF1Q9H116 711 aaPredicted RBP14.78□□□□□ -0.04
SSR4-202ENST00000370085 VRTNQ9H8Y1 702 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 CDY1Q9Y6F8 540 aa14.78□□□□□ -0.04
SSR4-202ENST00000370085 SPTLC1O15269 473 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 P4HA2O15460 535 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 CAVIN2O95810 425 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 CST3P01034 146 aaPredicted RBP14.77□□□□□ -0.05
SSR4-202ENST00000370085 HLA-DRAP01903 254 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 FAM163BP0C2L3 166 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 CPB1P15086 417 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 HOXB8P17481 243 aaPredicted RBP14.77□□□□□ -0.05
SSR4-202ENST00000370085 PCSK1P29120 753 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 ELF1P32519 619 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 OR1D2P34982 312 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 MTIF2P46199 727 aaKnown RBP14.77□□□□□ -0.05
SSR4-202ENST00000370085 CLCN4P51793 760 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 MYL6P60660 151 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 TSPY1Q01534 308 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 PPP3CAQ08209 521 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 ADAM15Q13444 863 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 MRPL58Q14197 206 aaKnown RBP14.77□□□□□ -0.05
SSR4-202ENST00000370085 NFKBIBQ15653 356 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 LIN9Q5TKA1 542 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 SLC8B1Q6J4K2 584 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 LLGL2Q6P1M3 1020 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 GLYCTKQ8IVS8 523 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 CXorf38Q8TB03 319 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 CNOT6LQ96LI5 555 aaKnown RBP14.77□□□□□ -0.05
SSR4-202ENST00000370085 CLSTN3Q9BQT9 956 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 UBE2ZQ9H832 354 aaPredicted RBP14.77□□□□□ -0.05
SSR4-202ENST00000370085 MAFFQ9ULX9 164 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 FAM50BQ9Y247 325 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 TIMM13Q9Y5L4 95 aaPredicted RBP14.77□□□□□ -0.05
SSR4-202ENST00000370085 HCFC2Q9Y5Z7 792 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 BRWD1Q9NSI6 2320 aa14.77□□□□□ -0.05
SSR4-202ENST00000370085 AFPP02771 609 aaKnown RBP14.76□□□□□ -0.05
SSR4-202ENST00000370085 RPL17P18621 184 aaKnown RBP14.76□□□□□ -0.05
SSR4-202ENST00000370085 IGFBP6P24592 240 aaPredicted RBP14.76□□□□□ -0.05
SSR4-202ENST00000370085 ARPP19P56211 112 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 MYL5Q02045 173 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 SMARCB1Q12824 385 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 RAB33AQ14088 237 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 COL19A1Q14993 1142 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 CTC1Q2NKJ3 1217 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 C1orf220Q5T0J3 134 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 WSCD1Q658N2 575 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 TPGS2Q68CL5 300 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 TMEM184AQ6ZMB5 413 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 C15orf39Q6ZRI6 1047 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 RTL10Q7L3V2 364 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 PALB2Q86YC2 1186 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 TRIM59Q8IWR1 403 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 DCP1BQ8IZD4 617 aaKnown RBP14.76□□□□□ -0.05
SSR4-202ENST00000370085 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 TMEM130Q8N3G9 435 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 PDCL2Q8N4E4 241 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 SLC35C1Q96A29 364 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 FAXDC2Q96IV6 333 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 FAM84AQ96KN4 292 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 DNAJC25Q9H1X3 360 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 SNX25Q9H3E2 840 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 RAB20Q9NX57 234 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 THEGQ9P2T0 379 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 NXF1Q9UBU9 619 aaKnown RBP14.76□□□□□ -0.05
SSR4-202ENST00000370085 FBXL5Q9UKA1 691 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 NFE2L3Q9Y4A8 694 aa14.76□□□□□ -0.05
SSR4-202ENST00000370085 SYCE3A1L190 88 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 SMTNL1A8MU46 457 aa14.75□□□□□ -0.05
SSR4-202ENST00000370085 PMM2O15305 246 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms