RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CCDC62Q6P9F0 684 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ABHD15Q6UXT9 468 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC47A2Q86VL8 602 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ARHGAP24Q8N264 748 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC20A1Q8WUM9 679 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 FAF2Q96CS3 445 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 RSAD1Q9HA92 442 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 PPCSQ9HAB8 311 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 AFG3L2Q9Y4W6 797 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 H3BRJ5 948 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 RBAK-RBAKDNI3L0D1 243 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 RPS6KA5O75582 802 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 PROSCO94903 275 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 NPTXRO95502 500 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 GLRA2P23416 452 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ADORA2BP29275 332 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 CARSP49589 748 aaKnown RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 FCGRTP55899 365 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 CORO7P57737 925 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 PPP2R2AP63151 447 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ENPEPQ07075 957 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 MCL1Q07820 350 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 MAPK7Q13164 816 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 STAT4Q14765 748 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 E2F5Q15329 346 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SNCBQ16143 134 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 EFHC2Q5JST6 749 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 GNASQ5JWF2 1037 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ARHGEF19Q8IW93 802 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 GOLPH3Q9H4A6 298 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 CISHQ9NSE2 258 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 SMARCAL1Q9NZC9 954 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 IPO11Q9UI26 975 aaKnown RBP5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 ITGA11Q9UKX5 1188 aa5.61□□□□□ -1.51
SMNDC1-202ENST00000369603 A0A087WZ62 844 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CLGNO14967 610 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 LPXNO60711 386 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 USP2O75604 605 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 KRT37O76014 449 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SKIP12755 728 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ITGA4P13612 1032 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 BRD2P25440 801 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PCSK1P29120 753 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 COILP38432 576 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 IFNAR2P48551 515 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TAF6P49848 677 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PDE1BQ01064 536 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SPIRE1Q08AE8 756 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PCBP1Q15365 356 aaKnown RBP eCLIP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CCDC6Q16204 474 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 EPC2Q52LR7 807 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 BOLA3Q53S33 107 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 MAP1SQ66K74 1059 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 APTXQ7Z2E3 356 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 EIF1ADQ8N9N8 165 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ATP11CQ8NB49 1132 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 C1orf131Q8NDD1 294 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PPP4R1Q8TF05 950 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TATDN2Q93075 761 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 FDXACB1Q9BRP7 624 aaPredicted RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ANKZF1Q9H8Y5 726 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 OSGEPQ9NPF4 335 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 FZD1Q9UP38 647 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 MYH1P12882 1939 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 C10orf71Q711Q0 1435 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 APOL1O14791 398 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TRAPPC3O43617 180 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 LCA5LO95447 670 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 CCNE2O96020 404 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ABL1P00519 1130 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 KCNA2P16389 499 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 GPD1P21695 349 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 AXLP30530 894 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 ARSEP51690 589 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 MYL6P60660 151 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 COPS2P61201 443 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 MAGOHP61326 146 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 PPP2R5DQ14738 602 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 GRIK4Q16099 956 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 UGCGQ16739 394 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SEZ6Q53EL9 994 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 FBXW10Q5XX13 1052 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 HEATR6Q6AI08 1181 aaKnown RBP5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 RPAINQ86UA6 219 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 FAM71AQ8IYT1 594 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 MCOLN2Q8IZK6 566 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 DNAAF3Q8N9W5 541 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SOCS4Q8WXH5 440 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SHC3Q92529 594 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 MFSD14AQ96MC6 490 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TRIM51Q9BSJ1 452 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 TTYH3Q9C0H2 523 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 SENP1Q9P0U3 644 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 KCNH4Q9UQ05 1017 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 INPP5FQ9Y2H2 1132 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 RIPK3Q9Y572 518 aa5.6□□□□□ -1.51
SMNDC1-202ENST00000369603 HEY1Q9Y5J3 304 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms