RNA–Protein interactions for RNA: ENST00000368930.5

CDC40-202, Transcript of cell division cycle 40, humanhuman

TSL 2 BASIC

Gene CDC40, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-202ENST00000368930 H0YHG0 523 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 DNM1LO00429 736 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
CDC40-202ENST00000368930 TOM1L1O75674 476 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 LSM8O95777 96 aaKnown RBP11.79□□□□□ -0.52
CDC40-202ENST00000368930 TGFB3P10600 412 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 HARSP12081 509 aaKnown RBP11.79□□□□□ -0.52
CDC40-202ENST00000368930 NFX1Q12986 1120 aaKnown RBP11.79□□□□□ -0.52
CDC40-202ENST00000368930 SPRED3Q2MJR0 410 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 ANKRD20A8PQ5CZ79 823 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 ZNF365Q70YC5 407 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
CDC40-202ENST00000368930 LRRC34Q8IZ02 419 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 CCDC197Q8NCU1 140 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 ARHGEF2Q92974 986 aaKnown RBP11.79□□□□□ -0.52
CDC40-202ENST00000368930 FAM118BQ9BPY3 351 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 MRPL4Q9BYD3 311 aaKnown RBP11.79□□□□□ -0.52
CDC40-202ENST00000368930 KDM4CQ9H3R0 1056 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 NINJ2Q9NZG7 142 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 A0A0G2JMZ2 1700 aa11.79□□□□□ -0.52
CDC40-202ENST00000368930 GOLGA6L7A0A1B0GV03 622 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 CALB1P05937 261 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ATP5DP30049 168 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 TCF7P36402 384 aaPredicted RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 SSR1P43307 286 aaKnown RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 VPS41P49754 854 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 HIRAP54198 1017 aaPredicted RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 MYL6P60660 151 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ZNF252P-AS1Q0IIN9 211 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ATP13A4Q4VNC1 1196 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 LRRC38Q5VT99 294 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 IER5Q5VY09 327 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 CDCA2Q69YH5 1023 aaPredicted RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 HIBCHQ6NVY1 386 aaPredicted RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 METTL7BQ6UX53 244 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ZBTB33Q86T24 672 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 SEPT1Q8WYJ6 367 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 PWWP2AQ96N64 755 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ACO2Q99798 780 aaKnown RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 TCHPQ9BT92 498 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 MTFR1LQ9H019 292 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 DNAJC17Q9NVM6 304 aaKnown RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 PPME1Q9Y570 386 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ABLIM1O14639 778 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 LIASO43766 372 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 TCF4P15884 667 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 GJC1P36383 396 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 CETN2P41208 172 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 LMNB2Q03252 620 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 PRKG1Q13976 671 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ITIH4Q14624 930 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 DUOXA2Q1HG44 320 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 IZUMO3Q5VZ72 239 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 DRICH1Q6PGQ1 229 aaPredicted RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 VSTM1Q6UX27 236 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 WDTC1Q8N5D0 677 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 RBM41Q96IZ5 413 aaKnown RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 SLITRK1Q96PX8 696 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 FOXP3Q9BZS1 431 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 ZNF518BQ9C0D4 1074 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 NIF3L1Q9GZT8 377 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 CISHQ9NSE2 258 aa11.78□□□□□ -0.52
CDC40-202ENST00000368930 CPSF3Q9UKF6 684 aaKnown RBP11.78□□□□□ -0.52
CDC40-202ENST00000368930 TMEM120BA0PK00 339 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 CCT8L1PA6NM43 557 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 PI4K2BG5E9Z4 385 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 OGTO15294 1046 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 TJP3O95049 919 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 GHRP10912 638 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 KRT10P13645 584 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 CREB1P16220 341 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 BRD2P25440 801 aaKnown RBP11.77□□□□□ -0.53
CDC40-202ENST00000368930 CDH5P33151 784 aaPredicted RBP11.77□□□□□ -0.53
CDC40-202ENST00000368930 NF2P35240 595 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 IFNAR2P48551 515 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 OGDHQ02218 1023 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 MCL1Q07820 350 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 LAMTOR4Q0VGL1 99 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 VGLL4Q14135 290 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 PPP1R15BQ5SWA1 713 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 ANKS4BQ8N8V4 417 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 TMEM35BQ8NCS4 154 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 KLHL11Q9NVR0 708 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 CTNNAL1Q9UBT7 734 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 LGALS13Q9UHV8 139 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 PCDHGC3Q9UN70 934 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 IVNS1ABPQ9Y6Y0 642 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 LRRC37A2A6NM11 1700 aa11.77□□□□□ -0.53
CDC40-202ENST00000368930 IGKV6-21A0A0C4DH24 114 aa11.76□□□□□ -0.53
CDC40-202ENST00000368930 ZBTB42B2RXF5 422 aa11.76□□□□□ -0.53
CDC40-202ENST00000368930 F8VP50 259 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms