RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 NDNQ99608 321 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 OSBPL8Q9BZF1 889 aa11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 CHCHD3Q9NX63 227 aaKnown RBP11.12□□□□□ -0.63
LYSMD1-201ENST00000368908 A0A1B0GVG6 124 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 DNALI1O14645 258 aaPredicted RBP11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 TM9SF1O15321 606 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 MSH4O15457 936 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 PYGLP06737 847 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 PIM1P11309 404 aaPredicted RBP11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CHRNA5P30532 468 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 MAPK4P31152 587 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CETN2P41208 172 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CDK7P50613 346 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 VAMP7P51809 220 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CYP4A11Q02928 519 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 PLEKHG4Q58EX7 1191 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 PCNX4Q63HM2 1172 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 KBTBD2Q8IY47 623 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 HERPUD2Q9BSE4 406 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 PHACTR1Q9C0D0 580 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 VPS11Q9H270 941 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 SAYSD1Q9NPB0 183 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CHORDC1Q9UHD1 332 aaPredicted RBP11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 R3HDM2Q9Y2K5 976 aaKnown RBP11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 PCDHA1Q9Y5I3 950 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 NUMBLQ9Y6R0 609 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 PSTPIP1O43586 416 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CYP3A4P08684 503 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 RARBP10826 455 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 FGFR1P11362 822 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 SLC16A2P36021 539 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 LSAMPQ13449 338 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 ALCAMQ13740 583 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 MAPK6Q16659 721 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 DALRD3Q5D0E6 543 aaKnown RBP11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 EFHC2Q5JST6 749 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 SYDE2Q5VT97 1194 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CCDC62Q6P9F0 684 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 LCA5Q86VQ0 697 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 CCNJLQ8IV13 435 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 C4orf33Q8N1A6 199 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 ZNF276Q8N554 614 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 TTLL6Q8N841 843 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 ALKBH8Q96BT7 664 aaKnown RBP11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 TRIM11Q96F44 468 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 HSD17B14Q9BPX1 270 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 MIS12Q9H081 205 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 SLX4Q8IY92 1834 aa11.11□□□□□ -0.63
LYSMD1-201ENST00000368908 FAM86B1E9PN63 330 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 FAM86B2P0C5J1 330 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 PLS3P13797 630 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 CRABP2P29373 138 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 RANBP1P43487 201 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 VPS41P49754 854 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 MFAP3P55082 362 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 DSG1Q02413 1049 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 PPP3CAQ08209 521 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 LIN52Q52LA3 116 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 NSMFQ6X4W1 530 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 NET1Q7Z628 596 aaPredicted RBP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 RBM12BQ8IXT5 1001 aaKnown RBP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 KLHL23Q8NBE8 558 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 RFWD2Q8NHY2 731 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 SLC5A5Q92911 643 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 KREMEN1Q96MU8 473 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 UBE2OQ9C0C9 1292 aaKnown RBP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 GPAMQ9HCL2 828 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 TAS2R1Q9NYW7 299 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 HEY2Q9UBP5 337 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 ANAPC7Q9UJX3 599 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 FAM170AA1A519 330 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 POC1B-GALNT4F8VUJ3 575 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 ALOX15BO15296 676 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 CYP26A1O43174 497 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 IMPDH2P12268 514 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 CYP11B1P15538 503 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 ARFIP2P53365 341 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 MCL1Q07820 350 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 HNRNPDQ14103 355 aaKnown RBP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 CLEC16AQ2KHT3 1053 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 P3H1Q32P28 736 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 TRMT5Q32P41 509 aaKnown RBP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 C1orf220Q5T0J3 134 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 DRICH1Q6PGQ1 229 aaPredicted RBP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 RINLQ6ZS11 566 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 ADGRG6Q86SQ4 1221 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 CHSY1Q86X52 802 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 DCAF4Q8WV16 495 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 WDR60Q8WVS4 1066 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 PPP2R3CQ969Q6 453 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 POLIQ9UNA4 740 aa11.1□□□□□ -0.63
LYSMD1-201ENST00000368908 CFAP69A5D8W1 941 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms