RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GYPCP04921 128 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 CFHP08603 1231 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 ARF4P18085 180 aaPredicted RBP10.79□□□□□ -0.68
TPM3-210ENST00000368530 NR2F2P24468 414 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 GLUD2P49448 558 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 CAPSQ13938 189 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 SYCP1Q15431 976 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 MAN2A1Q16706 1144 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 BMT2Q1RMZ1 405 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 VWA3BQ502W6 1294 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 FKBP15Q5T1M5 1219 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 NOTUMQ6P988 496 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 OTUD6AQ7L8S5 288 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 CCDC112Q8NEF3 446 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 ASAP3Q8TDY4 903 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 CCDC51Q96ER9 411 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 CEP63Q96MT8 703 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 FIZ1Q96SL8 496 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 BAG1Q99933 345 aaPredicted RBP10.79□□□□□ -0.68
TPM3-210ENST00000368530 NFKBIZQ9BYH8 718 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 NXF3Q9H4D5 531 aaKnown RBP10.79□□□□□ -0.68
TPM3-210ENST00000368530 TRMT1Q9NXH9 659 aaKnown RBP10.79□□□□□ -0.68
TPM3-210ENST00000368530 SEL1LQ9UBV2 794 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 METRNQ9UJH8 293 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 GIT1Q9Y2X7 761 aa10.79□□□□□ -0.68
TPM3-210ENST00000368530 ZMYM2Q9UBW7 1377 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 A0A1W2PQC6 194 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 PDXKO00764 312 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 EIF3DO15371 548 aaKnown RBP eCLIP10.78□□□□□ -0.68
TPM3-210ENST00000368530 B4GALT5O43286 388 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 TGM5O43548 720 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 NR3C1P04150 777 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 LAMP2P13473 410 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 GLRA2P23416 452 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 PEX3P56589 373 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 MXD4Q14582 209 aaPredicted RBP10.78□□□□□ -0.68
TPM3-210ENST00000368530 FOXR2Q6PJQ5 311 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 ZNF720Q7Z2F6 126 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 PALB2Q86YC2 1186 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 TMEM139Q8IV31 216 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 SMG7Q92540 1137 aaKnown RBP10.78□□□□□ -0.68
TPM3-210ENST00000368530 RABGGTAQ92696 567 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 NXPE3Q969Y0 559 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 NDST4Q9H3R1 872 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 PLEKHA4Q9H4M7 779 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 OCEL1Q9H607 264 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 FNIP2Q9P278 1114 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 FBXL21Q9UKT6 434 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 TRAF3IP3Q9Y228 551 aa10.78□□□□□ -0.68
TPM3-210ENST00000368530 CACNA1AO00555 2505 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 INO80B-WBP1J3KQ70 363 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 SLC16A4O15374 487 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 TGFB1I1O43294 461 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 ERLIN2O94905 339 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 SRFP11831 508 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 PLS3P13797 630 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 AKAP5P24588 427 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 GBP2P32456 591 aaPredicted RBP10.77□□□□□ -0.69
TPM3-210ENST00000368530 HTR4Q13639 388 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 TRIM14Q14142 442 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 EDRF1Q3B7T1 1238 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 FUT10Q6P4F1 479 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 CDR2LQ86X02 465 aaPredicted RBP10.77□□□□□ -0.69
TPM3-210ENST00000368530 CNGA4Q8IV77 575 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 SYCP3Q8IZU3 236 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 CCAR2Q8N163 923 aaKnown RBP10.77□□□□□ -0.69
TPM3-210ENST00000368530 GPR152Q8TDT2 470 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 DRC1Q96MC2 740 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 C16orf45Q96MC5 204 aaPredicted RBP10.77□□□□□ -0.69
TPM3-210ENST00000368530 PANX2Q96RD6 677 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 PAAF1Q9BRP4 392 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 RPP25Q9BUL9 199 aaKnown RBP10.77□□□□□ -0.69
TPM3-210ENST00000368530 COLEC11Q9BWP8 271 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 PRKD2Q9BZL6 878 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 CXCL16Q9H2A7 254 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 ZDHHC7Q9NXF8 308 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 LARSQ9P2J5 1176 aaKnown RBP10.77□□□□□ -0.69
TPM3-210ENST00000368530 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 DPP7Q9UHL4 492 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 ADAM28Q9UKQ2 775 aa10.77□□□□□ -0.69
TPM3-210ENST00000368530 EP300Q09472 2414 aaPredicted RBP10.77□□□□□ -0.69
TPM3-210ENST00000368530 UBE4BO95155 1302 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 TTC26A0AVF1 554 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 CCDC169A6NNP5 214 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 ZMYND10O75800 440 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 GNA14O95837 355 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 C7P10643 843 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 GLULP15104 373 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 RPL17P18621 184 aaKnown RBP10.76□□□□□ -0.69
TPM3-210ENST00000368530 KRT9P35527 623 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 CASP4P49662 377 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 CYP2J2P51589 502 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 NAB2Q15742 525 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 USP41Q3LFD5 358 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 RTP2Q5QGT7 225 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 E4F1Q66K89 784 aaPredicted RBP10.76□□□□□ -0.69
TPM3-210ENST00000368530 PHLDB3Q6NSJ2 640 aa10.76□□□□□ -0.69
TPM3-210ENST00000368530 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms