RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SMAD5Q99717 465 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ASIC1P78348 528 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 AKAP4Q5JQC9 854 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ZCRB1Q8TBF4 217 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NLRP4Q96MN2 994 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 BDH2Q9BUT1 245 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KIFC1Q9BW19 673 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 FHDC1Q9C0D6 1143 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TNFRSF10DQ9UBN6 386 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SNX2O60749 519 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RNH1P13489 461 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 FXR1P51114 621 aaKnown RBP eCLIP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 JAMLQ86YT9 394 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SLC6A15Q9H2J7 730 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 DENND4BO75064 1496 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TESPA1A2RU30 521 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ECDO95905 644 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 EEF2P13639 858 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 GP5P40197 560 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PHEXP78562 749 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ANGPTL8Q6UXH0 198 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 BAIAP2Q9UQB8 552 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PTPRUQ92729 1446 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SASH3O75995 380 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 WDR47O94967 919 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KCNQ4P56696 695 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NLRP6P59044 892 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TRPM8Q7Z2W7 1104 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SFRP1Q8N474 314 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 GIMAP8Q8ND71 665 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CDC6Q99741 560 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 FICDQ9BVA6 458 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RIBC2Q9H4K1 309 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PCYT1BQ9Y5K3 369 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 BNIP2Q12982 314 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 DPH6Q7L8W6 267 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SCYL3Q8IZE3 742 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PARD6BQ9BYG5 372 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SKAP2O75563 359 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 HOXD10P28358 340 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SMAD1Q15797 465 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ARMCX6Q7L4S7 300 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 STK32AQ8WU08 396 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 MIEF2Q96C03 454 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 LAMC1P11047 1609 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CCT8L1PA6NM43 557 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PTH1RQ03431 593 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PTGR1Q14914 329 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 IL31Q6EBC2 164 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SLC30A8Q8IWU4 369 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PLGRKTQ9HBL7 147 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ZFP57Q9NU63 452 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 JAK2O60674 1132 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CYP1A2P05177 515 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ALOX15P16050 662 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SESN2P58004 480 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ASPRV1Q53RT3 343 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TDRD5Q8NAT2 981 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ALG13Q9NP73 1137 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 FNIP2Q9P278 1114 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CRNNQ9UBG3 495 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CROTQ9UKG9 612 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ASB4Q9Y574 426 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TAC1P20366 129 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KLHL30Q0D2K2 578 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CDC16Q13042 620 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 GNASQ5JWF2 1037 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CCDC117Q8IWD4 279 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KITLGP21583 273 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 IFNAR2P48551 515 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 GRIK2Q13002 908 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ODR4Q5SWX8 454 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RNASE11Q8TAA1 199 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 DESI2Q9BSY9 194 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 ANKRD6Q9Y2G4 727 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 AIREO43918 545 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CASP1P29466 404 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SLCO2A1Q92959 643 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 TUBGCP5Q96RT8 1024 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 FKBPLQ9UIM3 349 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 C10orf71Q711Q0 1435 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SMCO2A6NFE2 343 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 IFNAR1P17181 557 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 LIN54Q6MZP7 749 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RAD9BQ6WBX8 426 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 EXOC3L1Q86VI1 746 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 REXO1Q8N1G1 1221 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CCSER1Q9C0I3 900 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KRT84Q9NSB2 600 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 C1orf109Q9NX04 203 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PRPF19Q9UMS4 504 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 DTNAQ9Y4J8 743 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CLPTM1O96005 669 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 MAPK4P31152 587 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 MRPL28Q13084 256 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PUM3Q15397 648 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SLC15A2Q16348 729 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CAPN12Q6ZSI9 719 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CDRT15Q96T59 188 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms