RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 CCDC127Q96BQ5 260 aa16.65■□□□□ 0.26
PRKN-203ENST00000366894 CDH22Q9UJ99 828 aa16.65■□□□□ 0.26
PRKN-203ENST00000366894 VWA8A3KMH1 1905 aa16.64■□□□□ 0.26
PRKN-203ENST00000366894 ANO9A1A5B4 782 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 TMEM221A6NGB7 291 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 M0R296 226 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 NFICP08651 508 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 KRT19P08727 400 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 FAM163BP0C2L3 166 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 P4HA1P13674 534 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 HOXB8P17481 243 aaPredicted RBP16.64■□□□□ 0.25
PRKN-203ENST00000366894 TRIM21P19474 475 aaKnown RBP16.64■□□□□ 0.25
PRKN-203ENST00000366894 ERCC5P28715 1186 aaPredicted RBP16.64■□□□□ 0.25
PRKN-203ENST00000366894 ATICP31939 592 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 VAMP7P51809 220 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 NLRP12P59046 1061 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 LILRA4P59901 499 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 SPAG1Q07617 926 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 ANKRD40Q6AI12 368 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 TRIM67Q6ZTA4 783 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 RTL10Q7L3V2 364 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 DPH6Q7L8W6 267 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 BMP8AQ7Z5Y6 402 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 SMYD4Q8IYR2 804 aaPredicted RBP16.64■□□□□ 0.25
PRKN-203ENST00000366894 THEM5Q8N1Q8 247 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 PRSS33Q8NF86 280 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 SPATA18Q8TC71 538 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 PARD3BQ8TEW8 1205 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 HDAC7Q8WUI4 952 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 NELFBQ8WX92 580 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
PRKN-203ENST00000366894 PBXIP1Q96AQ6 731 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 SUSD3Q96L08 255 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 APOL5Q9BWW9 433 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 NAT10Q9H0A0 1025 aaKnown RBP16.64■□□□□ 0.25
PRKN-203ENST00000366894 RWDD2AQ9UIY3 292 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 MAFFQ9ULX9 164 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 PLXNA3P51805 1871 aa16.64■□□□□ 0.25
PRKN-203ENST00000366894 PPP1R3GB7ZBB8 358 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 CCDC192P0DO97 292 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 ODC1P11926 461 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 FGFR3P22607 806 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 CLDN10P78369 228 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 ZCWPW2Q504Y3 356 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 KLHL10Q6JEL2 608 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 PRSS55Q6UWB4 352 aaPredicted RBP16.63■□□□□ 0.25
PRKN-203ENST00000366894 FRMD5Q7Z6J6 570 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 FAM114A1Q8IWE2 563 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 C12orf76Q8N812 135 aaPredicted RBP16.63■□□□□ 0.25
PRKN-203ENST00000366894 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 PIK3R5Q8WYR1 880 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 TAF4BQ92750 862 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 PHOX2BQ99453 314 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 IMPG2Q9BZV3 1241 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 ANO10Q9NW15 660 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 TUBGCP4Q9UGJ1 667 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 ARMCX3Q9UH62 379 aaPredicted RBP16.63■□□□□ 0.25
PRKN-203ENST00000366894 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 AGAP1Q9UPQ3 857 aa16.63■□□□□ 0.25
PRKN-203ENST00000366894 KPNA7A9QM74 516 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 I3L4J1 428 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 M0QZQ0 153 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 HUS1O60921 280 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 RPL17P18621 184 aaKnown RBP16.62■□□□□ 0.25
PRKN-203ENST00000366894 TYMPP19971 482 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 BRCC3P46736 316 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 SGSM1Q2NKQ1 1148 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 TRAPPC11Q7Z392 1133 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 TMEM86AQ8N2M4 240 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 ZSWIM2Q8NEG5 633 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 LNX1Q8TBB1 728 aaPredicted RBP16.62■□□□□ 0.25
PRKN-203ENST00000366894 BACE2Q9Y5Z0 518 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 USP34Q70CQ2 3546 aa16.62■□□□□ 0.25
PRKN-203ENST00000366894 ADAM12O43184 909 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 ITGB3P05106 788 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 YWHAHQ04917 246 aaPredicted RBP16.61■□□□□ 0.25
PRKN-203ENST00000366894 SMARCB1Q12824 385 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 BFSP1Q12934 665 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 BIRC3Q13489 604 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 PSMD5Q16401 504 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 CCDC40Q4G0X9 1142 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 RARS2Q5T160 578 aaKnown RBP16.61■□□□□ 0.25
PRKN-203ENST00000366894 ZNF280DQ6N043 979 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 LILRA6Q6PI73 481 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 MTMR12Q9C0I1 747 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 ADAM7Q9H2U9 754 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 PLEKHA4Q9H4M7 779 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 DZANK1Q9NVP4 752 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 ANK1P16157 1881 aa16.61■□□□□ 0.25
PRKN-203ENST00000366894 SPDYE4A6NLX3 237 aa16.6■□□□□ 0.25
PRKN-203ENST00000366894 LOC730098B7Z3J9 87 aa16.6■□□□□ 0.25
PRKN-203ENST00000366894 CYB561D2O14569 222 aa16.6■□□□□ 0.25
PRKN-203ENST00000366894 N4BP1O75113 896 aaKnown RBP16.6■□□□□ 0.25
PRKN-203ENST00000366894 AKAP3O75969 853 aa16.6■□□□□ 0.25
PRKN-203ENST00000366894 OAZ2O95190 189 aa16.6■□□□□ 0.25
PRKN-203ENST00000366894 WEE2P0C1S8 567 aa16.6■□□□□ 0.25
PRKN-203ENST00000366894 TKTP29401 623 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms