RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 DSCC1Q9BVC3 393 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PRG3Q9Y2Y8 225 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PDZK1P1A8MUH7 402 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 FOXN3O00409 490 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 MEIS1O00470 390 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 DPY19L2Q6NUT2 758 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PLEKHA5Q9HAU0 1116 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PREBQ9HCU5 417 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PMF1-BGLAPU3KQ54 211 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 FAM196BA6NMK8 535 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 C5orf58C9J3I9 102 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 C21orf2O43822 256 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 NLRP11P59045 1033 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 KRT72Q14CN4 511 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ELMOD1Q8N336 334 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZNF521Q96K83 1311 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 COG2Q14746 738 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 KIAA1755Q5JYT7 1200 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZMYM1Q5SVZ6 1142 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 JAMLQ86YT9 394 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 TINF2Q9BSI4 451 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 RSL24D1Q9UHA3 163 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PHTF1Q9UMS5 762 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZNF232Q9UNY5 417 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 SNPHO15079 494 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 TPST1O60507 370 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PDE8AO60658 829 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ENO2P09104 434 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 EIF4A2Q14240 407 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 KLHL38Q2WGJ6 581 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 LRRC6Q86X45 466 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PLGRKTQ9HBL7 147 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 BLOC1S6Q9UL45 172 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 TRIM17Q9Y577 477 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 HEY1Q9Y5J3 304 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 RAPGEF6Q8TEU7 1601 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 TBC1D12O60347 775 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ARL6IP4Q66PJ3 421 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 CENPTQ96BT3 561 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 TIMMDC1Q9NPL8 285 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PSMC3IPQ9P2W1 217 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 CNOT3O75175 753 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 CAV1Q03135 178 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ANKS3Q6ZW76 656 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ABCB10Q9NRK6 738 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZBTB39O15060 712 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 EIF2AK2P19525 551 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 MXI1P50539 228 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ARHGEF6Q15052 776 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 YTHDF3Q7Z739 585 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 RNF38Q9H0F5 515 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 DHX36Q9H2U1 1008 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 PRDM16Q9HAZ2 1276 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 CTNNAL1Q9UBT7 734 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 SOX13Q9UN79 622 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 EYA2O00167 538 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 USP1O94782 785 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 CHI3L2Q15782 390 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 ADCK2Q7Z695 626 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 EXOSC4Q9NPD3 245 aaKnown RBP11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 COQ6Q9Y2Z9 468 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 DUSP10Q9Y6W6 482 aa11.56□□□□□ -0.56
CDC42BPA-205ENST00000366769 FAM25AB3EWG3 89 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 FAM25CB3EWG5 89 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 FAM25GB3EWG6 89 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 YY1P25490 414 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 NCKAP1LP55160 1127 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 KCTD2Q14681 263 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 SPDYAQ5MJ70 313 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 PASD1Q8IV76 773 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 SLC7A3Q8WY07 619 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 WNK4Q96J92 1243 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZSCAN10Q96SZ4 725 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 KIAA0100Q14667 2235 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 PARNO95453 639 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 FESP07332 822 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 PTPN4P29074 926 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 ARL4DP49703 201 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 FXR1P51114 621 aaKnown RBP eCLIP11.55□□□□□ -0.565e-6■■■□□ 17.2
CDC42BPA-205ENST00000366769 KRR1Q13601 381 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 FAM26FQ5R3K3 315 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 JMJD4Q9H9V9 463 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 NSMCE4AQ9NXX6 385 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 A2MP01023 1474 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 SERPINB5P36952 375 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 DDI2Q5TDH0 399 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 TRMT2AQ8IZ69 625 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 TSPAN14Q8NG11 270 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 SDR42E1Q8WUS8 393 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 ECSITQ9BQ95 431 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 MAGEF1Q9HAY2 307 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 PTPN12Q05209 780 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 ARMCX4Q5H9R4 360 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 AHI1Q8N157 1196 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 TAMM41Q96BW9 452 aa11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 EPB41L4AQ9HCS5 686 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 IARS2Q9NSE4 1012 aaKnown RBP11.55□□□□□ -0.56
CDC42BPA-205ENST00000366769 RGS20O76081 388 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms