RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CASTOR2A6NHX0 329 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 CYP26A1O43174 497 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 THP07101 528 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 CD58P19256 250 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.31
CAPN9-203ENST00000366666 CLCNKBP51801 687 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 MFAP3P55082 362 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 PTK2Q05397 1052 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 BRD3Q15059 726 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 SLC47A2Q86VL8 602 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 C3orf58Q8NDZ4 430 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 SMYD3Q9H7B4 428 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 TFR2Q9UP52 801 aa13.08□□□□□ -0.31
CAPN9-203ENST00000366666 PIRO00625 290 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 ZNF263O14978 683 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 CCDC175P0C221 793 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 STAT1P42224 750 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 HNRNPH2P55795 449 aaKnown RBP13.08□□□□□ -0.32
CAPN9-203ENST00000366666 RBP5P82980 135 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 ASIC2Q16515 512 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 TDRD12Q587J7 1177 aaKnown RBP13.08□□□□□ -0.32
CAPN9-203ENST00000366666 CYP26C1Q6V0L0 522 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 ZNF571Q7Z3V5 609 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-203ENST00000366666 ZNF280BQ86YH2 543 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 FAM71AQ8IYT1 594 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 ACRBPQ8NEB7 543 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 SYN2Q92777 582 aaPredicted RBP13.08□□□□□ -0.32
CAPN9-203ENST00000366666 PGBD4Q96DM1 585 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 NIF3L1Q9GZT8 377 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 HMGXB4Q9UGU5 601 aa13.08□□□□□ -0.32
CAPN9-203ENST00000366666 DDHD2O94830 711 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 EOMESO95936 686 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 RFX1P22670 979 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 ORC1Q13415 861 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SMC1AQ14683 1233 aaKnown RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 TSR1Q2NL82 804 aaKnown RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 ZNF394Q53GI3 561 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 MFSD5Q6N075 450 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 UBR7Q8N806 425 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SLC20A1Q8WUM9 679 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 APBB2Q92870 758 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 PARD6BQ9BYG5 372 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 MYO6Q9UM54 1294 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 REXO2Q9Y3B8 237 aaKnown RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 CCDC151A5D8V7 595 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 UPP2O95045 317 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SERPING1P05155 500 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SKIP12755 728 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 KRT5P13647 590 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SYN1P17600 705 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SSTR3P32745 418 aaPredicted RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 CYP27A1Q02318 531 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 ASTE1Q2TB18 679 aaPredicted RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 ZNF667Q5HYK9 610 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 TMTC1Q8IUR5 882 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 C7orf61Q8IZ16 206 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 HNRNPLLQ8WVV9 542 aaKnown RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 BCO2Q9BYV7 579 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 CISHQ9NSE2 258 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 ZNHIT6Q9NWK9 470 aaKnown RBP13.07□□□□□ -0.32
CAPN9-203ENST00000366666 NME7Q9Y5B8 376 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 SNX9Q9Y5X1 595 aa13.07□□□□□ -0.32
CAPN9-203ENST00000366666 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 HCRTO43612 131 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 SASH3O75995 380 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 ABL1P00519 1130 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 ITGB1P05556 798 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 CYP3A5P20815 502 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 LRPAP1P30533 357 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 CDK17Q00537 523 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 GFPT1Q06210 699 aaPredicted RBP13.06□□□□□ -0.32
CAPN9-203ENST00000366666 CNKSR3Q6P9H4 555 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 TMEM270Q6UE05 265 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 NOP9Q86U38 636 aaKnown RBP13.06□□□□□ -0.32
CAPN9-203ENST00000366666 PALB2Q86YC2 1186 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 CEP112Q8N8E3 955 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 HASPINQ8TF76 798 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 SECISBP2LQ93073 1101 aaKnown RBP13.06□□□□□ -0.32
CAPN9-203ENST00000366666 TWNKQ96RR1 684 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 MMS19Q96T76 1030 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 SYT11Q9BT88 431 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 NUCKS1Q9H1E3 243 aaKnown RBP13.06□□□□□ -0.32
CAPN9-203ENST00000366666 VRTNQ9H8Y1 702 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 PSD3Q9NYI0 1048 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 DNAJB4Q9UDY4 337 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 PCDHB4Q9Y5E5 795 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 CEP290O15078 2479 aa13.06□□□□□ -0.32
CAPN9-203ENST00000366666 A0A087X0T9 212 aa13.05□□□□□ -0.32
CAPN9-203ENST00000366666 POLR3GO15318 223 aaPredicted RBP13.05□□□□□ -0.32
CAPN9-203ENST00000366666 NDUFA10O95299 355 aa13.05□□□□□ -0.32
CAPN9-203ENST00000366666 PARNO95453 639 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms