RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 METTL14Q9HCE5 456 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 WDR6Q9NNW5 1121 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 XPNPEP1Q9NQW7 623 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC2A4RGQ9NR83 387 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 KCND1Q9NSA2 647 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 SPTLC3Q9NUV7 552 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 DMAC2Q9NW81 257 aa12.18□□□□□ -0.46
CSNK1E-202ENST00000366216 A0A0U1RQF3 1178 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 CCDC195A0A1B0GUA6 201 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 CARNS1A5YM72 827 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 H0YCG3 227 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 GYPCP04921 128 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 CNPP09543 421 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 NPTX2P47972 431 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 PEX3P56589 373 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 CSTF1Q05048 431 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 DMWDQ09019 674 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 KCNA1Q09470 495 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 EMC2Q15006 297 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 MTERF2Q49AM1 385 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 ZNF484Q5JVG2 852 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 HAUS6Q7Z4H7 955 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 EXOC8Q8IYI6 725 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 METTL13Q8N6R0 699 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 ZBTB44Q8NCP5 570 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 CMASQ8NFW8 434 aaPredicted RBP12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 LPPQ93052 612 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 SHDQ96IW2 340 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 KLHL5Q96PQ7 755 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 SH2D3AQ9BRG2 576 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 BCO2Q9BYV7 579 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 RHOBTB2Q9BYZ6 727 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 NRDE2Q9H7Z3 1164 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 GPRC5CQ9NQ84 441 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 MAN1C1Q9NR34 630 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 ZSCAN32Q9NX65 697 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 EXOC7Q9UPT5 735 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 TICRRQ7Z2Z1 1910 aa12.17□□□□□ -0.46
CSNK1E-202ENST00000366216 LAMA1P25391 3075 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 ANHXE9PGG2 379 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 PES1O00541 588 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 GAS2O43903 313 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 STX10O60499 249 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 LILRB5O75023 590 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 MFAP3LO75121 409 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 GALTP07902 379 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 EPB41P11171 864 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 FECHP22830 423 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 EIF4BP23588 611 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 ARL2P36404 184 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 AFF1P51825 1210 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 NLRP11P59045 1033 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 HTR4Q13639 388 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 NOLC1Q14978 699 aaKnown RBP eCLIP12.16□□□□□ -0.463e-6■■□□□ 12.8
CSNK1E-202ENST00000366216 ACAP1Q15027 740 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 CEP135Q66GS9 1140 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 CYP26C1Q6V0L0 522 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 TRMT1LQ7Z2T5 733 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 SYCP3Q8IZU3 236 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 TMEM161BQ8NDZ6 487 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 RSPH1Q8WYR4 309 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 IFT74Q96LB3 600 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 PARD6AQ9NPB6 346 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 KMT5AQ9NQR1 393 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 AGPAT3Q9NRZ7 376 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 DNAJB4Q9UDY4 337 aa12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 ARMCX3Q9UH62 379 aaPredicted RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 DSPP15924 2871 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-202ENST00000366216 IGF2RP11717 2491 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 A0A1W2PQJ5 194 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 KANSL1LA0AUZ9 987 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC30A4O14863 429 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 CLIC2O15247 247 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC16A4O15374 487 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 ARHGAP6O43182 974 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 MAFO75444 373 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 AKAP3O75969 853 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 CASP14P31944 242 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 PSMC2P35998 433 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 SLC11A1P49279 550 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 ADKP55263 362 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 DRP2Q13474 957 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 PPP2R5AQ15172 486 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 SYCP1Q15431 976 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 ELMSAN1Q6PJG2 1045 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 ZNF280BQ86YH2 543 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 TMEM139Q8IV31 216 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 MAP4K3Q8IVH8 894 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 KSR1Q8IVT5 923 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 LRRC71Q8N4P6 559 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 NETO1Q8TDF5 533 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 BSNDQ8WZ55 320 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 NELL1Q92832 810 aa12.15□□□□□ -0.46
CSNK1E-202ENST00000366216 BAG1Q99933 345 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms