RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TRIP13Q15645 432 aaPredicted RBP9.72□□□□□ -0.85
CALD1-202ENST00000361901 AMHR2Q16671 573 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 TBC1D25Q3MII6 688 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 KBTBD12Q3ZCT8 623 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 CCDC197Q8NCU1 140 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 ZNF564Q8TBZ8 553 aaPredicted RBP9.72□□□□□ -0.85
CALD1-202ENST00000361901 MAIP1Q8WWC4 291 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 SEMA4DQ92854 862 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 MAGOHBQ96A72 148 aaKnown RBP9.72□□□□□ -0.85
CALD1-202ENST00000361901 KLHL11Q9NVR0 708 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 MYH11P35749 1972 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 LYPLA2O95372 231 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 ATP6V1G2O95670 118 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 GJA8P48165 433 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 C10orf76Q5T2E6 689 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 IFT20Q8IY31 132 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 OR5B17Q8NGF7 314 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 OR6B3Q8NGW1 331 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 KCND1Q9NSA2 647 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 AIPL1Q9NZN9 384 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 ASIC3Q9UHC3 531 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 SALL4Q9UJQ4 1053 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 INPP5FQ9Y2H2 1132 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 C2CD2Q9Y426 696 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 HES2Q9Y543 173 aa9.72□□□□□ -0.85
CALD1-202ENST00000361901 ANO9A1A5B4 782 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 ANKRD33BA6NCL7 494 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 PGRMC1O00264 195 aaKnown RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 TLR3O15455 904 aaKnown RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 STRNO43815 780 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 ITGB3P05106 788 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 ATP4AP20648 1035 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 RAP1GAPP47736 663 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 SPRYD7Q5W111 196 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 EEF1DP3Q658K8 133 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 RBBP8NLQ8NC74 664 aaPredicted RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 HAUS1Q96CS2 278 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 MRRFQ96E11 262 aaKnown RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 RBM41Q96IZ5 413 aaKnown RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 RPGRIP1Q96KN7 1286 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 NSRP1Q9H0G5 558 aaKnown RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 DLGAP2Q9P1A6 1054 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 CORO1CQ9ULV4 474 aaPredicted RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 ATP2A1O14983 1001 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 OGTO15294 1046 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 P4HA1P13674 534 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 GARTP22102 1010 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 NCKAP1LP55160 1127 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 DYNLT1P63172 113 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 CDO1Q16878 200 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 C1QTNF12Q5T7M4 302 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 TMEM154Q6P9G4 183 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 IRF2BP2Q7Z5L9 587 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 MYCBPAPQ8TBZ2 947 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 C17orf50Q8WW18 174 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 RFFLQ8WZ73 363 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 ACAP3Q96P50 834 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 FAM118BQ9BPY3 351 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 GCOM2Q9BZD3 368 aaPredicted RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 ABHD16BQ9H3Z7 469 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 RBM12Q9NTZ6 932 aaKnown RBP9.71□□□□□ -0.85
CALD1-202ENST00000361901 NFU1Q9UMS0 254 aa9.71□□□□□ -0.85
CALD1-202ENST00000361901 GMNCA6NCL1 334 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 RTN2O75298 545 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 NPTXRO95502 500 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 RARBP10826 455 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 SCTRP47872 440 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 CDH8P55286 799 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 HGSNATQ68CP4 663 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 NANOGNBQ7Z5D8 188 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 APBB1IPQ7Z5R6 666 aaPredicted RBP9.71□□□□□ -0.86
CALD1-202ENST00000361901 PALB2Q86YC2 1186 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 DNAJB3Q8WWF6 145 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 SYN2Q92777 582 aaPredicted RBP9.71□□□□□ -0.86
CALD1-202ENST00000361901 ARL8AQ96BM9 186 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 RNPC3Q96LT9 517 aaKnown RBP9.71□□□□□ -0.86
CALD1-202ENST00000361901 BLOC1S6Q9UL45 172 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 UTP11Q9Y3A2 253 aaKnown RBP9.71□□□□□ -0.86
CALD1-202ENST00000361901 CYP11B1P15538 503 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 SFSWAPQ12872 951 aaKnown RBP9.71□□□□□ -0.86
CALD1-202ENST00000361901 PAK2Q13177 524 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 GRIK4Q16099 956 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 SLC5A9Q2M3M2 681 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 TRAPPC11Q7Z392 1133 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 ERICH1Q86X53 443 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 CYFIP2Q96F07 1278 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 PLEKHG4BQ96PX9 1271 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 NUB1Q9Y5A7 615 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 SNX9Q9Y5X1 595 aa9.71□□□□□ -0.86
CALD1-202ENST00000361901 ZMYM2Q9UBW7 1377 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 MAGEB2O15479 319 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 PGK1P00558 417 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 KRT14P02533 472 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 FESP07332 822 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 GTF2H1P32780 548 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 MPP3Q13368 585 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 DNAJC24Q6P3W2 148 aa9.7□□□□□ -0.86
CALD1-202ENST00000361901 RNF25Q96BH1 459 aaPredicted RBP9.7□□□□□ -0.86
CALD1-202ENST00000361901 ARHGEF26Q96DR7 871 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms