RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CTNNA2P26232 953 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 PRKCIP41743 596 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 PSMC4P43686 418 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 HIRAP54198 1017 aaPredicted RBP13.4□□□□□ -0.26
VAMP1-201ENST00000361716 FASTKD3Q14CZ7 662 aaKnown RBP13.4□□□□□ -0.26
VAMP1-201ENST00000361716 MAPK6Q16659 721 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 CYFIP1Q7L576 1253 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 C10orf82Q8WW14 230 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 TAS2R1Q9NYW7 299 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 ANAPC7Q9UJX3 599 aa13.4□□□□□ -0.26
VAMP1-201ENST00000361716 PDXKO00764 312 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 DKC1O60832 514 aaKnown RBP eCLIP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ITIH2P19823 946 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ALDH18A1P54886 795 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 NPEPPSP55786 919 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 IRX4P78413 519 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 OCRLQ01968 901 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 CCDC15Q0P6D6 951 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 PLEKHG4Q58EX7 1191 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 RAB3IL1Q8TBN0 382 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ACSF2Q96CM8 615 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 TMEM109Q9BVC6 243 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 AMNQ9BXJ7 453 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 TMEM120AQ9BXJ8 343 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 FAF1Q9UNN5 650 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 PHF24Q9UPV7 400 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 TMCC1O94876 653 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 AP2B1P63010 937 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 GRAPQ13588 217 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 R3HDM1Q15032 1099 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 EDRF1Q3B7T1 1238 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ALYREFQ86V81 257 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 NAT14Q8WUY8 206 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 DHX38Q92620 1227 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 GATA6Q92908 595 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 MTBPQ96DY7 904 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 SIKE1Q9BRV8 207 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 STK33Q9BYT3 514 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 KIAA1586Q9HCI6 787 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 SIX2Q9NPC8 291 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 NUMBLQ9Y6R0 609 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 OATP04181 439 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 MYL2P10916 166 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ANPEPP15144 967 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 DYNLT1P63172 113 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ASPHQ12797 758 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 MPP3Q13368 585 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 TRIP10Q15642 601 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 PCNX4Q63HM2 1172 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 RIPOR1Q6ZS17 1223 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 ARHGAP27Q6ZUM4 889 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 CCDC110Q8TBZ0 833 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 LENG1Q96BZ8 264 aaPredicted RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 OLFM3Q96PB7 478 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 TSSK1BQ9BXA7 367 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 IQCGQ9H095 443 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 APEX2Q9UBZ4 518 aa13.39□□□□□ -0.27
VAMP1-201ENST00000361716 R3HDM2Q9Y2K5 976 aaKnown RBP13.39□□□□□ -0.27
VAMP1-201ENST00000361716 MSH4O15457 936 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ASMTLO95671 621 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ITGA2BP08514 1039 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ATXN3P54252 364 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ADARP55265 1226 aaKnown RBP13.38□□□□□ -0.27
VAMP1-201ENST00000361716 NR1H3Q13133 447 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 IYDQ6PHW0 289 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 STXBP4Q6ZWJ1 553 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 YIPF2Q9BWQ6 316 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ZNF831Q5JPB2 1677 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 MAPK4P31152 587 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 IGBP1P78318 339 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 STAT4Q14765 748 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 CLUL1Q15846 466 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 COBLL1Q53SF7 1204 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 RBM44Q6ZP01 1051 aaKnown RBP13.38□□□□□ -0.27
VAMP1-201ENST00000361716 ARHGEF19Q8IW93 802 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 FBXO27Q8NI29 283 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 GSDMBQ8TAX9 411 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 CFAP57Q96MR6 1250 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 TMOD2Q9NZR1 351 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 STX18Q9P2W9 335 aaKnown RBP13.38□□□□□ -0.27
VAMP1-201ENST00000361716 PPM1HQ9ULR3 514 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 DUOX1Q9NRD9 1551 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 BHMG1C9JSJ3 638 aaPredicted RBP13.38□□□□□ -0.27
VAMP1-201ENST00000361716 F5H6K3 240 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 COQ9O75208 318 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 POTEJP0CG39 1038 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 CD58P19256 250 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 CDK7P50613 346 aa13.38□□□□□ -0.27
VAMP1-201ENST00000361716 MOGSQ13724 837 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms