RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 MRPS6P82932 125 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 IRF5Q13568 498 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ALKAL1Q6UXT8 129 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PAQR9Q6ZVX9 377 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 SRGAP1Q7Z6B7 1085 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DDX42Q86XP3 938 aaKnown RBP eCLIP3.06□□□□□ -1.92
LTN1-201ENST00000361371 SYN2Q92777 582 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 SNX27Q96L92 541 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CPXM1Q96SM3 734 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 JPH2Q9BR39 696 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 AP1M1Q9BXS5 423 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 NFKBIZQ9BYH8 718 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 NIF3L1Q9GZT8 377 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 STARD7Q9NQZ5 370 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TMPRSS4Q9NRS4 437 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 FAM105AQ9NUU6 356 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DPP3Q9NY33 737 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PCDHB2Q9Y5E7 798 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 CLDN5O00501 218 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 MAPK13O15264 365 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PMM2O15305 246 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 P4HA2O15460 535 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PJA2O43164 708 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 THAP12O43422 761 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 KIF5CO60282 957 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 GGCXP38435 758 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 LBX1P52954 281 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 POU5F1BQ06416 359 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PTP4A2Q12974 167 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 BMS1Q14692 1282 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 DCAF12L1Q5VU92 463 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.06□□□□□ -1.92
LTN1-201ENST00000361371 DEFB128Q7Z7B8 93 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TTC30AQ86WT1 665 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PXYLP1Q8TE99 480 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CFHR5Q9BXR6 569 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ISCUQ9H1K1 167 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 GPATCH2LQ9NWQ4 482 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CDC23Q9UJX2 597 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 GTF3C4Q9UKN8 822 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 LAMA3Q16787 3333 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 SBF1O95248 1867 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TADA3O75528 432 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DDHD2O94830 711 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CSPG5O95196 566 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 LDHAP00338 332 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 PFKMP08237 780 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CKBP12277 381 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 COMTP21964 271 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 KRT83P78385 493 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PPARDQ03181 441 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 C2orf54Q08AI8 447 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TRPC3Q13507 836 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DSC3Q14574 896 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ZNF699Q32M78 642 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ZNF667Q5HYK9 610 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PRIMPOLQ96LW4 560 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CCDC94Q9BW85 323 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 RBM12Q9NTZ6 932 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 ZNF446Q9NWS9 450 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CNOT8Q9UFF9 292 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 PTPN22Q9Y2R2 807 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TRPV2Q9Y5S1 764 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 H0YCG3 227 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DDX3YO15523 660 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 SLU7O95391 586 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 TMEM253P0C7T8 217 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 GPD2P43304 727 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 NUMBP49757 651 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 CLCNKBP51801 687 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TMEM132DQ14C87 1099 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TRIM60Q495X7 471 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TIGD5Q53EQ6 642 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 SDHAF4Q5VUM1 108 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 PAPD7Q5XG87 772 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 WSCD1Q658N2 575 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 FBXO38Q6PIJ6 1188 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ZNF653Q96CK0 615 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 HPDLQ96IR7 371 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 KCNK16Q96T55 309 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 NAPGQ99747 312 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 RTP3Q9BQQ7 232 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 DDX47Q9H0S4 455 aaKnown RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 TSPYL2Q9H2G4 693 aaPredicted RBP3.06□□□□□ -1.92
LTN1-201ENST00000361371 PDCL3Q9H2J4 239 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ANKZF1Q9H8Y5 726 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 ABCB6Q9NP58 842 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TMLHEQ9NVH6 421 aa3.06□□□□□ -1.92
LTN1-201ENST00000361371 TCRBV5S1A1TA0A578 114 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 CTIFO43310 598 aaKnown RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 KRT86O43790 486 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 GAS2O43903 313 aaKnown RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 CILPO75339 1184 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 UPP2O95045 317 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 ACRP10323 421 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 CASQ1P31415 396 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 RFC1P35251 1148 aaPredicted RBP3.05□□□□□ -1.92
LTN1-201ENST00000361371 NDUFV1P49821 464 aa3.05□□□□□ -1.92
LTN1-201ENST00000361371 VSNL1P62760 191 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms