RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 NSUN6Q8TEA1 469 aaKnown RBP6.17□□□□□ -1.42
DSC3-201ENST00000360428 MAGEB18Q96M61 343 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 CARD9Q9H257 536 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 BARHL2Q9NY43 387 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 FAM153AQ9UHL3 310 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 CHMP2BQ9UQN3 213 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 BCS1LQ9Y276 419 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 ATP10AO60312 1499 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 EMSYQ7Z589 1322 aa6.17□□□□□ -1.42
DSC3-201ENST00000360428 CPSF1Q10570 1443 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 TBKBP1A7MCY6 615 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 A8MXQ7 604 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 O00370 1275 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 IGF2BP3O00425 579 aaKnown RBP eCLIP6.16□□□□□ -1.42
DSC3-201ENST00000360428 XPO1O14980 1071 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 SOAT2O75908 522 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 EYA4O95677 639 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ALDH1A1P00352 501 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 HNRNPH1P31943 449 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 FDFT1P37268 417 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CTCFP49711 727 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 PDK1Q15118 436 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ALX1Q15699 326 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ARMC3Q5W041 872 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 TWF2Q6IBS0 349 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 NLRP9Q7RTR0 991 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 MMGT1Q8N4V1 131 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 SCFD2Q8WU76 684 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 MAGED4Q96JG8 741 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PDLIM2Q96JY6 352 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PUS3Q9BZE2 481 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 KLHL4Q9C0H6 718 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CLEC4MQ9H2X3 399 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 BSDC1Q9NW68 430 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 GEMIN8Q9NWZ8 242 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 INO80Q9ULG1 1556 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 ESYT3A0FGR9 886 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CLRN2A0PK11 232 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 POTECB2RU33 542 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 SRGNP10124 158 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 NQO1P15559 274 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 CNTFP26441 200 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 HOXA13P31271 388 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 TALDO1P37837 337 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 MAGEA4P43358 317 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CRKLP46109 303 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 FNTAP49354 379 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 TOB2Q14106 344 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 NAB2Q15742 525 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PTGISQ16647 500 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 LONRF1Q17RB8 773 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 TRIM65Q6PJ69 517 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 KDM7AQ6ZMT4 941 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ARHGAP27Q6ZUM4 889 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PPIL6Q8IXY8 311 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CENPLQ8N0S6 344 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 FAM45AQ8TCE6 357 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 SYN2Q92777 582 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 RSAD1Q9HA92 442 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ARHGEF3Q9NR81 526 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 APEX2Q9UBZ4 518 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 USP21Q9UK80 565 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 SLC30A1Q9Y6M5 507 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 NCAPD2Q15021 1401 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 A0A087WWV3 80 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 IFNA14P01570 189 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PRR29P0C7W0 189 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ATXN3P54252 364 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 ATP2C1P98194 919 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 LRRC36Q1X8D7 754 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CACHD1Q5VU97 1274 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 TAF2Q6P1X5 1199 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 LRRC8DQ7L1W4 858 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CCNJLQ8IV13 435 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CROCCP3Q8IVE0 287 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 SVOPQ8N4V2 548 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 AGR3Q8TD06 166 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ANKRD7Q92527 254 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 GOLPH3Q9H4A6 298 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 SPHKAPQ2M3C7 1700 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 ATP5BP06576 529 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 PPP3CCP48454 512 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CYP4Z2PQ8N1L4 340 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 GLMNQ92990 594 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 USP13Q92995 863 aaPredicted RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 HPS3Q969F9 1004 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 RMDN3Q96TC7 470 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PIGUQ9H490 435 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PCMTD2Q9NV79 361 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 DBR1Q9UK59 544 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 A0A1B0GTH6 734 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 EIF4E1BA6NMX2 242 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 PSMD14O00487 310 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 VWA5AO00534 786 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 PRKAB2O43741 272 aa6.16□□□□□ -1.42
DSC3-201ENST00000360428 CNOT3O75175 753 aaKnown RBP6.16□□□□□ -1.42
DSC3-201ENST00000360428 GLRA3O75311 464 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms