RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 COA1Q9GZY4 146 aa16.76■□□□□ 0.27
COL18A1-203ENST00000359759 BATF3Q9NR55 127 aa16.76■□□□□ 0.27
COL18A1-203ENST00000359759 AGAP1Q9UPQ3 857 aa16.76■□□□□ 0.27
COL18A1-203ENST00000359759 MLNP12872 115 aa16.76■□□□□ 0.27
COL18A1-203ENST00000359759 PDGFRAP16234 1089 aa16.76■□□□□ 0.27
COL18A1-203ENST00000359759 MAGEA4P43358 317 aa16.76■□□□□ 0.27
COL18A1-203ENST00000359759 CTCFP49711 727 aaPredicted RBP16.76■□□□□ 0.27
COL18A1-203ENST00000359759 PTRHD1Q6GMV3 140 aaKnown RBP16.76■□□□□ 0.27
COL18A1-203ENST00000359759 YAF2Q8IY57 180 aa16.76■□□□□ 0.27
COL18A1-203ENST00000359759 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
COL18A1-203ENST00000359759 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 ZCCHC18P0CG32 403 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 PTPN7P35236 360 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 NUMBP49757 651 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 C10orf53Q8N6V4 93 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 ZBTB10Q96DT7 871 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 DIABLOQ9NR28 239 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 CCT8L1PA6NM43 557 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 PARNO95453 639 aaKnown RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 GPSM2P81274 684 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 CCNI2Q6ZMN8 369 aaPredicted RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 UBXN8O00124 270 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 HNRNPRO43390 633 aaKnown RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 RASSF9O75901 435 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 ARL4DP49703 201 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 QRICH1Q2TAL8 776 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 ZRANB3Q5FWF4 1079 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 METTL16Q86W50 562 aaKnown RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 TMEM143Q96AN5 459 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 APEX2Q9UBZ4 518 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 A0A1W2PQC6 194 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 PDE5AO76074 875 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 HNRNPH1P31943 449 aaKnown RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 TRIM71Q2Q1W2 868 aaKnown RBP16.75■□□□□ 0.27
COL18A1-203ENST00000359759 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 SGF29Q96ES7 293 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 PRKCBP05771 671 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 RFX3P48380 749 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 HPCAP84074 193 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 GPR141Q7Z602 305 aa16.75■□□□□ 0.27
COL18A1-203ENST00000359759 STRNO43815 780 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 PGK2P07205 417 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 MYBP10242 640 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 VHLP40337 213 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 AGBL2Q5U5Z8 902 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 OR8H2Q8N162 312 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 GUF1Q8N442 669 aaKnown RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 DDHD1Q8NEL9 900 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 VN1R5Q7Z5H4 357 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 UBA3Q8TBC4 463 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 ECSITQ9BQ95 431 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 PSD3Q9NYI0 1048 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 SLC39A10Q9ULF5 831 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 DNMT1P26358 1616 aaKnown RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 CLASP2O75122 1294 aaKnown RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 KCNJ1P48048 391 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 SERPINB9P50453 376 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 TWF1Q12792 350 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 CYP4A22Q5TCH4 519 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 OTOAQ7RTW8 1153 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 GOLPH3Q9H4A6 298 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 SNX9Q9Y5X1 595 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 NCF1BA6NI72 391 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 NCF1CA8MVU1 366 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 CDH16O75309 829 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 NCF1P14598 390 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 TFE3P19532 575 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.74■□□□□ 0.274e-6■■■■■ 32.5
COL18A1-203ENST00000359759 RUBCNQ92622 972 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 CENPTQ96BT3 561 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 SPASTQ9UBP0 616 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 SLC30A1Q9Y6M5 507 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 KRT16P08779 473 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 VEPH1Q14D04 833 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 SLC18A3Q16572 532 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 CCDC149Q6ZUS6 474 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 TLK2Q86UE8 772 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 MB21D2Q8IYB1 491 aaPredicted RBP16.74■□□□□ 0.27
COL18A1-203ENST00000359759 DYTNA2CJ06 578 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 TMEM62Q0P6H9 643 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 LAMC2Q13753 1193 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 DNAJC7Q99615 494 aa16.74■□□□□ 0.27
COL18A1-203ENST00000359759 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 E4F1Q66K89 784 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-203ENST00000359759 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 BARGINQ6ZT62 677 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 JAMLQ86YT9 394 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 FAM71DQ8N9W8 422 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 HAO1Q9UJM8 370 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 ECE2O60344 883 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 IMPAD1Q9NX62 359 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 SKAP2O75563 359 aaPredicted RBP16.73■□□□□ 0.27
COL18A1-203ENST00000359759 DDHD2O94830 711 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 CHRM3P20309 590 aa16.73■□□□□ 0.27
COL18A1-203ENST00000359759 CCZ1BP86790 482 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms