RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 WNK4Q96J92 1243 aa19.21■□□□□ 0.67
SHANK1-202ENST00000359082 KBTBD13C9JR72 458 aa19.21■□□□□ 0.67
SHANK1-202ENST00000359082 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-202ENST00000359082 TCF3P15923 654 aa19.21■□□□□ 0.67
SHANK1-202ENST00000359082 ZC2HC1CQ53FD0 456 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-202ENST00000359082 OLFML2BQ68BL8 750 aa19.21■□□□□ 0.67
SHANK1-202ENST00000359082 UVRAGQ9P2Y5 699 aa19.21■□□□□ 0.67
SHANK1-202ENST00000359082 USP15Q9Y4E8 981 aaPredicted RBP19.21■□□□□ 0.67
SHANK1-202ENST00000359082 KCNA3P22001 575 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 LVRNQ6Q4G3 990 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 BYSLQ13895 437 aaKnown RBP19.2■□□□□ 0.66
SHANK1-202ENST00000359082 AGPAT5Q9NUQ2 364 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 ITGA4P13612 1032 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 KCNK10P57789 538 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 BAATQ14032 418 aaPredicted RBP19.2■□□□□ 0.66
SHANK1-202ENST00000359082 FBXW10Q5XX13 1052 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 IRX2Q9BZI1 471 aaPredicted RBP19.2■□□□□ 0.66
SHANK1-202ENST00000359082 EXOSC4Q9NPD3 245 aaKnown RBP19.2■□□□□ 0.66
SHANK1-202ENST00000359082 FHOD1Q9Y613 1164 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 RFX7Q2KHR2 1363 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 DPYDQ12882 1025 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 C3orf62Q6ZUJ4 267 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 HERC5Q9UII4 1024 aaKnown RBP19.2■□□□□ 0.66
SHANK1-202ENST00000359082 XPO1O14980 1071 aaKnown RBP19.2■□□□□ 0.66
SHANK1-202ENST00000359082 HPCAP84074 193 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 FUT11Q495W5 492 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 STKLD1Q8NE28 680 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 CYFIP2Q96F07 1278 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 SPATA16Q9BXB7 569 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 CATSPERBQ9H7T0 1116 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 PSD3Q9NYI0 1048 aa19.2■□□□□ 0.66
SHANK1-202ENST00000359082 KIAA0391O15091 583 aaKnown RBP19.19■□□□□ 0.66
SHANK1-202ENST00000359082 EPB42P16452 691 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 STILQ15468 1287 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CACNA2D2Q9NY47 1150 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 WDR35Q9P2L0 1181 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CLASP2O75122 1294 aaKnown RBP19.19■□□□□ 0.66
SHANK1-202ENST00000359082 PDIA5Q14554 519 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 NEDD1Q8NHV4 660 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 SMARCAD1Q9H4L7 1026 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 FAM47DPA6NHR8 397 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 STXBP3O00186 592 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 KRT16P08779 473 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 UBTFL6P0CB48 400 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-202ENST00000359082 PWP1Q13610 501 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CHI3L2Q15782 390 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 UGP2Q16851 508 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 DCAF6Q58WW2 860 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CEP78Q5JTW2 689 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 PCYOX1LQ8NBM8 494 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 ACSF2Q96CM8 615 aaPredicted RBP19.19■□□□□ 0.66
SHANK1-202ENST00000359082 PHF20Q9BVI0 1012 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 GPD1P21695 349 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 SCARF1Q14162 830 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 SV2CQ496J9 727 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 RBM12Q9NTZ6 932 aaKnown RBP19.19■□□□□ 0.66
SHANK1-202ENST00000359082 DDHD2O94830 711 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 RHOBTB1O94844 696 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CHRM3P20309 590 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CYP2C19P33261 490 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 ITGA8P53708 1063 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 SP8Q8IXZ3 490 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 KIF2BQ8N4N8 673 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CMTM5Q96DZ9 223 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 SEC16BQ96JE7 1060 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 KATNAL1Q9BW62 490 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 GPR63Q9BZJ6 419 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 BRD8Q9H0E9 1235 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 POLBP06746 335 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 SRGNP10124 158 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 RALBP11234 206 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 UCHL3P15374 230 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 CHRNA5P30532 468 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 KHDRBS2Q5VWX1 349 aaKnown RBP19.19■□□□□ 0.66
SHANK1-202ENST00000359082 ERP27Q96DN0 273 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 OSBPL10Q9BXB5 764 aa19.19■□□□□ 0.66
SHANK1-202ENST00000359082 COPG1Q9Y678 874 aaKnown RBP19.19■□□□□ 0.66
SHANK1-202ENST00000359082 ZNF521Q96K83 1311 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 PRDM15P57071 1507 aaPredicted RBP19.18■□□□□ 0.66
SHANK1-202ENST00000359082 FOXP2O15409 715 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 PPP1R37O75864 691 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 DGAT1O75907 488 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 CCDC81Q6ZN84 652 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 CNBD2Q96M20 576 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 PI4K2AQ9BTU6 479 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 TRIM9Q9C026 710 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 NSMCE4AQ9NXX6 385 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 RAD51CO43502 376 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 CAND2O75155 1236 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 RPS6KA5O75582 802 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 GH1P01241 217 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 LAMB3Q13751 1172 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 C12orf60Q5U649 245 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 MICALL2Q8IY33 904 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 AGGF1Q8N302 714 aaeCLIP19.18■□□□□ 0.66
SHANK1-202ENST00000359082 ADRA2BP18089 450 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 SPRP35270 261 aaPredicted RBP19.18■□□□□ 0.66
SHANK1-202ENST00000359082 OR1G1P47890 313 aa19.18■□□□□ 0.66
SHANK1-202ENST00000359082 SLC16A1P53985 500 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms