RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PIKFYVEQ9Y2I7 2098 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ATP5BP06576 529 aaKnown RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 UCHL3P15374 230 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PAX3P23760 479 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ITGADQ13349 1161 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PIH1D3Q9NQM4 214 aaKnown RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 MED7O43513 233 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 CDK16Q00536 496 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 CCDC153Q494R4 210 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PARP10Q53GL7 1025 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 HSPH1Q92598 858 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF277Q9NRM2 450 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 MYO9AB2RTY4 2548 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 MYO1GB0I1T2 1018 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 DDX3XO00571 662 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 SLC13A5Q86YT5 568 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PYDC1Q8WXC3 89 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 APOL4Q9BPW4 351 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 SPG11Q96JI7 2443 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 LAMC3Q9Y6N6 1575 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 UMODL1Q5DID0 1318 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RHOBTB3O94955 611 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 CNGA2Q16280 664 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 AASDHQ4L235 1098 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RBM44Q6ZP01 1051 aaKnown RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ANO3Q9BYT9 981 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PTTG2Q9NZH5 202 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 HESX1Q9UBX0 185 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TRPC5OSA6NMA1 111 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 MGRN1O60291 552 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 CNOT3O75175 753 aaKnown RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 LBRQ14739 615 aaKnown RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RASA2Q15283 850 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 CCDC85BQ15834 202 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 IYDQ6PHW0 289 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 DEFB107AQ8IZN7 70 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 POU5F2Q8N7G0 328 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 AGR3Q8TD06 166 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ANKRD36BP1Q96IX9 119 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RPAP3Q9H6T3 665 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 HPS5Q9UPZ3 1129 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 KLHL20Q9Y2M5 609 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 NUDT2P50583 147 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 CASP5P51878 434 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ASPRV1Q53RT3 343 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 GIN1Q9NXP7 522 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ZSWIM5Q9P217 1185 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 HPSEQ9Y251 543 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 SUGT1Q9Y2Z0 365 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ZHX2Q9Y6X8 837 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM191BP0C7N4 346 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TYK2P29597 1187 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PTENP60484 403 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TRAF2Q12933 501 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 EDRF1Q3B7T1 1238 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 HABP4Q5JVS0 413 aaKnown RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 EGFLAMQ63HQ2 1017 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RINLQ6ZS11 566 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 GLMNQ92990 594 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PAFAH2Q99487 392 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TEKT3Q9BXF9 490 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RNPEPQ9H4A4 650 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 FAM25AB3EWG3 89 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 FAM25CB3EWG5 89 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 FAM25GB3EWG6 89 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 MATN2O00339 956 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 SNX3O60493 162 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TSC22D2O75157 780 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 CHRNA2Q15822 529 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 NCAPG2Q86XI2 1143 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 AGPAT1Q99943 283 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 GCOM2Q9BZD3 368 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PCIF1Q9H4Z3 704 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 SYNJ2BP-COX16A0A087WUM0 186 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 C1orf232A0A0U1RR37 186 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RIPK2O43353 540 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TRMUO75648 421 aaKnown RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 MYCLP12524 364 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 IL12RB1P42701 662 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 NAA20P61599 178 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ITKQ08881 620 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ORC2Q13416 577 aaPredicted RBP6.35□□□□□ -1.39
VPS13B-203ENST00000358544 EPHA10Q5JZY3 1008 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM206Q9H813 350 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ASNSD1Q9NWL6 643 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 RRN3Q9NYV6 651 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 COX16Q9P0S2 106 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 DOCK8Q8NF50 2099 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 NPEPPSP55786 919 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 USPL1Q5W0Q7 1092 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 OSBPL6Q9BZF3 934 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 NSMCE4AQ9NXX6 385 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 C15orf38-AP3S2A0A0A6YYH1 394 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 NFIBO00712 420 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 WEE2P0C1S8 567 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 IL2RBP14784 551 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 TAS2R42Q7RTR8 314 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 ARPINQ7Z6K5 226 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 SUN5Q8TC36 379 aa6.35□□□□□ -1.39
VPS13B-203ENST00000358544 PACSIN1Q9BY11 444 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms