RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ZNF384Q8TF68 577 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 C7orf43Q8WVR3 580 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ELMO3Q96BJ8 720 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 MYH3P11055 1940 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 AKAP11Q9UKA4 1901 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ADCY3O60266 1144 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 LPXNO60711 386 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 BANF1O75531 89 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PDE5AO76074 875 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ZSCAN5DPP0CG00 497 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ARL4CP56559 192 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 CDK16Q00536 496 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 ARSHQ5FYA8 562 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 LRRC8BQ6P9F7 803 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 SMIM5Q71RC9 77 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PRPF39Q86UA1 669 aaKnown RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 FAM178BQ8IXR5 827 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 STKLD1Q8NE28 680 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 CCDC127Q96BQ5 260 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 FAM111AQ96PZ2 611 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 MAK16Q9BXY0 300 aaKnown RBP12.05□□□□□ -0.48
CNOT3-202ENST00000358389 LRRC19Q9H756 370 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 LGALS13Q9UHV8 139 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PCDHA3Q9Y5H8 950 aa12.05□□□□□ -0.48
CNOT3-202ENST00000358389 PI4K2BG5E9Z4 385 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 TRAFD1O14545 582 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 ALAS1P13196 640 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 CD58P19256 250 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 FUT4P22083 530 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 RGS2P41220 211 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 CTAGE3PQ8IX95 158 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 KAT5Q92993 513 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 GCNAQ96QF7 691 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 YIPF2Q9BWQ6 316 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 PSMC3IPQ9P2W1 217 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 APPL1Q9UKG1 709 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 PCDHA1Q9Y5I3 950 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 SPDYE16A6NNV3 312 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 IRX4P78413 519 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 TMPRSS15P98073 1019 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 PRKG1Q13976 671 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 B3GNT6Q6ZMB0 384 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 KCTD1Q719H9 257 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 RBM15BQ8NDT2 890 aaKnown RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 GSTCDQ8NEC7 633 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 PYROXD1Q8WU10 500 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 OXNAD1Q96HP4 312 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 RABGAP1Q9Y3P9 1069 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 ARSEP51690 589 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 PDK3Q15120 406 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 TRMT5Q32P41 509 aaKnown RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 BBS9Q3SYG4 887 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 C1orf228Q6PIY5 440 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 CATSPER3Q86XQ3 398 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 TMPRSS6Q8IU80 811 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 ARID3BQ8IVW6 561 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-202ENST00000358389 PCDHA2Q9Y5H9 948 aa12.04□□□□□ -0.48
CNOT3-202ENST00000358389 EMSYQ7Z589 1322 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 BMP3P12645 472 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 RXRBP28702 533 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 HPCAP84074 193 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 ORC2Q13416 577 aaPredicted RBP12.03□□□□□ -0.48
CNOT3-202ENST00000358389 HIC1Q14526 733 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 EFCAB3Q8N7B9 438 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 GDPD5Q8WTR4 605 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 USP6NLQ92738 828 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 DCLK3Q9C098 648 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 SLC16A3O15427 465 aaKnown RBP12.03□□□□□ -0.48
CNOT3-202ENST00000358389 PTK6Q13882 451 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 TMEM63BQ5T3F8 832 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 ZNF554Q86TJ5 538 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 ULK2Q8IYT8 1036 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 DGCR14Q96DF8 476 aaKnown RBP12.03□□□□□ -0.48
CNOT3-202ENST00000358389 SRP68Q9UHB9 627 aaKnown RBP12.03□□□□□ -0.48
CNOT3-202ENST00000358389 ASTN1O14525 1302 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 SGK1O00141 431 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 CCDC166P0CW27 439 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 CDK8P49336 464 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 SBK1Q52WX2 424 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 ODR4Q5SWX8 454 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 CENPUQ71F23 418 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 PTF1AQ7RTS3 328 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
CNOT3-202ENST00000358389 A0A0J9YVX5 310 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 SMIM31A0A1B0GVY4 71 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 ETS1P14921 441 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 AQP4P55087 323 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 PPIDQ08752 370 aaKnown RBP12.02□□□□□ -0.48
CNOT3-202ENST00000358389 DLG1Q12959 904 aa12.02□□□□□ -0.48
CNOT3-202ENST00000358389 DCTN2Q13561 401 aaKnown RBP12.02□□□□□ -0.48
CNOT3-202ENST00000358389 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms