RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 CLK1P49759 484 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 IZUMO3Q5VZ72 239 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 SDE2Q6IQ49 451 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 MSL3Q8N5Y2 521 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 PTPRN2Q92932 1015 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 TSEN34Q9BSV6 310 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 RNPEPQ9H4A4 650 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 CLPTM1O96005 669 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 DARSP14868 501 aaKnown RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 IFNEQ86WN2 208 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 ARHGEF38Q9NXL2 777 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 L1RE1Q9UN81 338 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 ALDH1A2O94788 518 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 SHROOM1Q2M3G4 852 aaPredicted RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 WASHC2DQ5SRD0 308 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 FRMD5Q7Z6J6 570 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 C2orf40Q9H1Z8 148 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 ZFYVE1Q9HBF4 777 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 KPNA4O00629 521 aaPredicted RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 FSBPO95073 299 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 FCER1AP12319 257 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 SERPINB8P50452 374 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 DRAP1Q14919 205 aaPredicted RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 NR1I3Q14994 352 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 KRT78Q8N1N4 520 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 KRT84Q9NSB2 600 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 SPASTQ9UBP0 616 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 CASP1P29466 404 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 COASYQ13057 564 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 UGP2Q16851 508 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 SH2D3CQ8N5H7 860 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 MARCOQ9UEW3 520 aaPredicted RBP12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 CDYLQ9Y232 598 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 TMEM120BA0PK00 339 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 POTEFA5A3E0 1075 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 AHCYL1O43865 530 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 TSC22D2O75157 780 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 PRCPP42785 496 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 KBTBD12Q3ZCT8 623 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 PCNX4Q63HM2 1172 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 POTEGQ6S5H5 508 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 POTEEQ6S8J3 1075 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 RIN3Q8TB24 985 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 C19orf60Q96EN9 201 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 SOX13Q9UN79 622 aa12.01□□□□□ -0.49
SPTBN1-202ENST00000356805 CAPN1P07384 714 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 SHCBP1Q8NEM2 672 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 APBB2Q92870 758 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 CD248Q9HCU0 757 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 AMACRQ9UHK6 382 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 PIN4Q9Y237 131 aaKnown RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 PSMA3P25788 255 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 MZF1P28698 734 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 ZIM3Q96PE6 472 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 SEPT5Q99719 369 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 SH3GL1Q99961 368 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 XPO7Q9UIA9 1087 aaKnown RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 KCNH4Q9UQ05 1017 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 ABLIM1O14639 778 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 RGS5O15539 181 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 NUP62P37198 522 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 BTKQ06187 659 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 LSM7Q9UK45 103 aaKnown RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 STAT3P40763 770 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 AP3B2Q13367 1082 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 PTRHD1Q6GMV3 140 aaKnown RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 TTC33Q6PID6 262 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 RTKN2Q8IZC4 609 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 THTPAQ9BU02 230 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 LAMC1P11047 1609 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 MYL2P10916 166 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 GUCA1AP43080 201 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 TOB2Q14106 344 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 RCN1Q15293 331 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 PI16Q6UXB8 463 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 OR6J1Q8NGC5 347 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 TASP1Q9H6P5 420 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 POTECB2RU33 542 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L15C9J2P7 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L13C9JLJ4 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L11C9JVI0 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L18D6R9N7 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L22D6RA61 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L17D6RBQ6 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L19D6RCP7 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L20D6RJB6 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 DGKIO75912 1065 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L24Q0WX57 530 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 USP17L6PQ6QN14 398 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12□□□□□ -0.491e-6■□□□□ 9.2
SPTBN1-202ENST00000356805 RBBP8NLQ8NC74 664 aaPredicted RBP12□□□□□ -0.49
SPTBN1-202ENST00000356805 MAGED4Q96JG8 741 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 RAD21L1Q9H4I0 556 aa12□□□□□ -0.49
SPTBN1-202ENST00000356805 SH3BP1Q9Y3L3 701 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms