RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 FLT1P17948 1338 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 GOLGA8RI6L899 631 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ORC4O43929 436 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CARSP49589 748 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 KCNH2Q12809 1159 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 NCAPHQ15003 741 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 C16orf62Q7Z3J2 963 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 GLYCTKQ8IVS8 523 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 SKA1Q96BD8 255 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 C17orf80Q9BSJ5 609 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 NFKBIZQ9BYH8 718 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 BATF3Q9NR55 127 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 HSPBP1Q9NZL4 362 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 TTC7AQ9ULT0 858 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 SNX24Q9Y343 169 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 EMSYQ7Z589 1322 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 KCNN4O15554 427 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 EYA4O95677 639 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 URODP06132 367 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PEX19P40855 299 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ARFIP2P53365 341 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 NLRP11P59045 1033 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PTPN12Q05209 780 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ST3GAL1Q11201 340 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ANGEL2Q5VTE6 544 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 UGT3A1Q6NUS8 523 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 FAM47EQ6ZV65 393 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 APLFQ8IW19 511 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 HS6ST3Q8IZP7 471 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ATP9BO43861 1147 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 SLC11A2P49281 568 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 EIF3EP60228 445 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 STARD3Q14849 445 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PDIA6Q15084 440 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 HIF1AQ16665 826 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 STRIP1Q5VSL9 837 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 XRRA1Q6P2D8 792 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 GLT1D1Q96MS3 346 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 RBBP8Q99708 897 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 GPR63Q9BZJ6 419 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 WWP1Q9H0M0 922 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 TMEM260Q9NX78 707 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ERAP1Q9NZ08 941 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 MAP10Q9P2G4 905 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 MZF1P28698 734 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PRDX5P30044 214 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 GFPT1Q06210 699 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 POLD3Q15054 466 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ATP6V0D2Q8N8Y2 350 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 C1orf131Q8NDD1 294 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF507Q8TCN5 953 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 TMEM169Q96HH4 297 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CDK5RAP1Q96SZ6 601 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CACNA2D2Q9NY47 1150 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 SLC39A10Q9ULF5 831 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 F5H6K3 240 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PSMD14O00487 310 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 NDUFB5O43674 189 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 APOA1P02647 267 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CCDC159P0C7I6 412 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CKBP12277 381 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 OR1G1P47890 313 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 KLRC3Q07444 240 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 IZUMO3Q5VZ72 239 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 FRMD5Q7Z6J6 570 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 TRIM69Q86WT6 500 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ENAHQ8N8S7 591 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ICA1LQ8NDH6 482 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CRAMP1Q96RY5 1269 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ZCCHC17Q9NP64 241 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PAPOLBQ9NRJ5 636 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 AKAP7Q9P0M2 348 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 A0A1B0GTH6 734 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 FAM187AA6NFU0 413 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 MTSS1O43312 755 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 EPB42P16452 691 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 SERPINB9P50453 376 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 IRX1P78414 480 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PREPLQ4J6C6 727 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 RASGRP2Q7LDG7 609 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PHACTR4Q8IZ21 702 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 VMP1Q96GC9 406 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CCDC3Q9BQI4 270 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 THG1LQ9NWX6 298 aaKnown RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 FBXL21Q9UKT6 434 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 SNTNA6NMZ2 147 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 TTLL13PA6NNM8 815 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 C16orf96A6NNT2 1141 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ENTPD3O75355 529 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 SASH3O75995 380 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 MBL2P11226 248 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-202ENST00000356435 KRT20P35900 424 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 LRRC74AQ0VAA2 488 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 CUL3Q13618 768 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 LAMC2Q13753 1193 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ATF7IP2Q5U623 682 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 ANO5Q75V66 913 aa5.79□□□□□ -1.48
PTPRD-202ENST00000356435 PRUNE1Q86TP1 453 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms