RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 TMEM173Q86WV6 379 aaPredicted RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ZC3H3Q8IXZ2 948 aaKnown RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 EFCAB13Q8IY85 973 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ZNF560Q96MR9 790 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CGRRF1Q99675 332 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 TSG101Q99816 390 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 VN1R3Q9BXE9 311 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 NUP62CLQ9H1M0 184 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 CXCL16Q9H2A7 254 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ALG13Q9NP73 1137 aaKnown RBP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNOT4-202ENST00000356162 DMAC2Q9NW81 257 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 TUBGCP4Q9UGJ1 667 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 DNMT3LQ9UJW3 386 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 PLXNA3P51805 1871 aa4.3□□□□□ -1.72
CNOT4-202ENST00000356162 ARHGEF37A1IGU5 675 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 GOLGA8IPA6NC78 632 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ZNF233A6NK53 670 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 GOLGA8JA6NMD2 632 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 NT5C1B-RDH14C9J2C7 533 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 SPINT1O43278 529 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 SRGAP2BP0DMP2 458 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 DSG1Q02413 1049 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 LRRC63Q05C16 580 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CAMK1Q14012 370 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 MORC3Q14149 939 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 PTPN14Q15678 1187 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ZBTB6Q15916 424 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 DUSP6Q16828 381 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 UPP1Q16831 310 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TCEAL5Q5H9L2 206 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 WDR49Q8IV35 697 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 VPS52Q8N1B4 723 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 MICALL1Q8N3F8 863 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CACTINQ8WUQ7 758 aaKnown RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 C18orf25Q96B23 403 aaPredicted RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ANKRD36BP1Q96IX9 119 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TCF25Q9BQ70 676 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 PCIF1Q9H4Z3 704 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ITGA11Q9UKX5 1188 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 IRAK3Q9Y616 596 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ANO9A1A5B4 782 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 BICDL2A1A5D9 508 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ERVH48-1M5A8F1 160 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 PSMA7O14818 248 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 SYN3O14994 580 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CLIC2O15247 247 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 SLC16A3O15427 465 aaKnown RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TRAPPC3O43617 180 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 EXOC3O60645 756 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TADA2AO75478 443 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 C1RP00736 705 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TNNC2P02585 160 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TMEM191BP0C7N4 346 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CCNE1P24864 410 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 RPL13P26373 211 aaKnown RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 IRS1P35568 1242 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 PNPLA4P41247 253 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 PRCPP42785 496 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 AARSP49588 968 aaKnown RBP eCLIP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CLCNKBP51801 687 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 AP3M2P53677 418 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 SNRNP35Q16560 246 aaKnown RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 USP41Q3LFD5 358 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 XP32Q5T750 250 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CENPPQ6IPU0 288 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CD300LGQ6UXG3 332 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TMC7Q7Z402 723 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CBWD2Q8IUF1 395 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ADSSL1Q8N142 457 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 EFHBQ8N7U6 833 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 ZSWIM2Q8NEG5 633 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 NOC3LQ8WTT2 800 aaKnown RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 PIK3R5Q8WYR1 880 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 IRF7Q92985 503 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 DHTKD1Q96HY7 919 aaPredicted RBP4.29□□□□□ -1.72
CNOT4-202ENST00000356162 SUSD3Q96L08 255 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 MFSD14AQ96MC6 490 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 FNBP1Q96RU3 617 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 PAAF1Q9BRP4 392 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 MKNK1Q9BUB5 465 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 EMILIN2Q9BXX0 1053 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 GOLGA2P5Q9HBQ8 144 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 RXFP1Q9HBX9 757 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 TMPRSS4Q9NRS4 437 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 DZANK1Q9NVP4 752 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 FNIP2Q9P278 1114 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 CACNG4Q9UBN1 327 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 COG5Q9UP83 839 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 DENND4AQ7Z401 1863 aa4.29□□□□□ -1.72
CNOT4-202ENST00000356162 C2orf71A6NGG8 1288 aa4.28□□□□□ -1.72
CNOT4-202ENST00000356162 F8W810 466 aa4.28□□□□□ -1.72
CNOT4-202ENST00000356162 LILRA1O75019 489 aa4.28□□□□□ -1.72
CNOT4-202ENST00000356162 EPB41P11171 864 aaKnown RBP4.28□□□□□ -1.72
CNOT4-202ENST00000356162 TYMPP19971 482 aa4.28□□□□□ -1.72
CNOT4-202ENST00000356162 FGFR3P22607 806 aa4.28□□□□□ -1.72
CNOT4-202ENST00000356162 NR2F2P24468 414 aa4.28□□□□□ -1.72
CNOT4-202ENST00000356162 MCM4P33991 863 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms