RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 NSUN6Q8TEA1 469 aaKnown RBP7.72□□□□□ -1.17
VPS13A-201ENST00000355766 CRYGNQ8WXF5 182 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 ATP6V0A1Q93050 837 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 RMDN1Q96DB5 314 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 HRASLS5Q96KN8 279 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 HEXIM2Q96MH2 286 aaKnown RBP7.72□□□□□ -1.17
VPS13A-201ENST00000355766 MBOAT7Q96N66 472 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 IWS1Q96ST2 819 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 CCSER1Q9C0I3 900 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 UBA5Q9GZZ9 404 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 TUBE1Q9UJT0 475 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 MRPL11Q9Y3B7 192 aaKnown RBP7.72□□□□□ -1.17
VPS13A-201ENST00000355766 MRVI1Q9Y6F6 885 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 EPG5Q9HCE0 2579 aa7.72□□□□□ -1.17
VPS13A-201ENST00000355766 VPS13AQ96RL7 3174 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 ENC1O14682 589 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 PAGE1O75459 146 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 CYP3A4P08684 503 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 MARCKSP29966 332 aaPredicted RBP7.71□□□□□ -1.18
VPS13A-201ENST00000355766 NTF4P34130 210 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 SREBF1P36956 1147 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 PDIA5Q14554 519 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 ZRSR1Q15695 479 aaKnown RBP7.71□□□□□ -1.18
VPS13A-201ENST00000355766 TMEM266Q2M3C6 531 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 HSDL1Q3SXM5 330 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 USH1GQ495M9 461 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 EARS2Q5JPH6 523 aaKnown RBP7.71□□□□□ -1.18
VPS13A-201ENST00000355766 PPM1JQ5JR12 505 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 KRBA2Q6ZNG9 492 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 ATG4DQ86TL0 474 aaPredicted RBP7.71□□□□□ -1.18
VPS13A-201ENST00000355766 GAS2L3Q86XJ1 694 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 MCF2L2Q86YR7 1114 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 CEP57L1Q8IYX8 460 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 C4orf32Q8N8J7 132 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 IQUBQ8NA54 791 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 SPATA20Q8TB22 786 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 SPPL3Q8TCT6 385 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 SYTL5Q8TDW5 730 aaPredicted RBP7.71□□□□□ -1.18
VPS13A-201ENST00000355766 POF1BQ8WVV4 589 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 TAAR1Q96RJ0 339 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 SDF4Q9BRK5 362 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 C16orf70Q9BSU1 422 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 COL20A1Q9P218 1284 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 MRPL42Q9Y6G3 142 aaKnown RBP7.71□□□□□ -1.18
VPS13A-201ENST00000355766 NCOR2Q9Y618 2525 aa7.71□□□□□ -1.18
VPS13A-201ENST00000355766 A0A1B0GVL5 298 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 MEIS2O14770 477 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 PPFIA4O75335 1185 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 DGKIO75912 1065 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 SMC2O95347 1197 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 SMIM10L2AP0DMW4 78 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 SMIM10L2BP0DMW5 78 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 GHRP10912 638 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 XRCC6P12956 609 aaKnown RBP eCLIP7.7□□□□□ -1.18
VPS13A-201ENST00000355766 ITIH2P19823 946 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 GSTT1P30711 240 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 SETQ01105 290 aaPredicted RBP7.7□□□□□ -1.18
VPS13A-201ENST00000355766 CCDC173Q0VFZ6 552 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 INF2Q27J81 1249 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 Q4G0T1 1027 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 XRRA1Q6P2D8 792 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 UBE3DQ7Z6J8 389 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 RBM23Q86U06 439 aaKnown RBP7.7□□□□□ -1.18
VPS13A-201ENST00000355766 SLFN12Q8IYM2 578 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 UBALD2Q8IYN6 164 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 CMTR2Q8IYT2 770 aaKnown RBP7.7□□□□□ -1.18
VPS13A-201ENST00000355766 IGSF22Q8N9C0 903 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 KREMEN2Q8NCW0 462 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 LRRN4CLQ8ND94 238 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 CNNM3Q8NE01 707 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 VN1R2Q8NFZ6 395 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 TBCKQ8TEA7 893 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 ATP8B4Q8TF62 1192 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 SPATA33Q96N06 139 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 GSDMAQ96QA5 445 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 MTMR9Q96QG7 549 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 RMDN3Q96TC7 470 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 ANO3Q9BYT9 981 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 CSRNP2Q9H175 543 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 TNKS2Q9H2K2 1166 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 VAT1LQ9HCJ6 419 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 SORCS3Q9UPU3 1222 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 FAM186AA6NE01 2351 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 FRMPD4Q14CM0 1322 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 RIF1Q5UIP0 2472 aaKnown RBP7.7□□□□□ -1.18
VPS13A-201ENST00000355766 DMXL1Q9Y485 3027 aa7.7□□□□□ -1.18
VPS13A-201ENST00000355766 PTPRZ1P23471 2315 aaPredicted RBP7.69□□□□□ -1.18
VPS13A-201ENST00000355766 ZNF292O60281 2723 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 GCOM1H8Y6P7 765 aaPredicted RBP7.69□□□□□ -1.18
VPS13A-201ENST00000355766 IKBKBO14920 756 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 CCNT1O60563 726 aaKnown RBP7.69□□□□□ -1.18
VPS13A-201ENST00000355766 FBXO24O75426 580 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 EIF3JO75822 258 aaKnown RBP7.69□□□□□ -1.18
VPS13A-201ENST00000355766 GGPS1O95749 300 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 LGALS2P05162 132 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 POLR2MP0CAP2 368 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 MUTP22033 750 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 UBA1P22314 1058 aaKnown RBP7.69□□□□□ -1.18
VPS13A-201ENST00000355766 MCM7P33993 719 aa7.69□□□□□ -1.18
VPS13A-201ENST00000355766 PPP1R2P41236 205 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms