RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TMA16Q96EY4 203 aaKnown RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 TSPAN17Q96FV3 270 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 OTUB1Q96FW1 271 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 L3MBTL3Q96JM7 780 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 NPHS2Q9NP85 383 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ITGB3P05106 788 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 MAGEA9P43362 315 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SPATA18Q8TC71 538 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 TSC22D3Q99576 134 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 RIT2Q99578 217 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 C5orf58C9J3I9 102 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 MYO1CO00159 1063 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ITIH2P19823 946 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 PGM1P36871 562 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ACADSBP45954 432 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 RPS6P62753 249 aaKnown RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ZNF200P98182 395 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ZBTB17Q13105 803 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 NOTUMQ6P988 496 aa13.84□□□□□ -0.19
SCN8A-202ENST00000355133 ACSF2Q96CM8 615 aaPredicted RBP13.84□□□□□ -0.19
SCN8A-202ENST00000355133 SSU72P8A0A1W2PR75 194 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 KLRK1P26718 216 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 CPT1AP50416 773 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 HIC1Q14526 733 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 MEI1Q5TIA1 1274 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 STYK1Q6J9G0 422 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 CHSY1Q86X52 802 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 GRAMD1AQ96CP6 724 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 NIF3L1Q9GZT8 377 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 CATSPERBQ9H7T0 1116 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 CDV3Q9UKY7 258 aaKnown RBP13.83□□□□□ -0.19
SCN8A-202ENST00000355133 PCDHB2Q9Y5E7 798 aa13.83□□□□□ -0.19
SCN8A-202ENST00000355133 MED14O60244 1454 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 EIF3DO15371 548 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCN8A-202ENST00000355133 CHN1P15882 459 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 STX3Q13277 289 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 NR1I3Q14994 352 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
SCN8A-202ENST00000355133 EDRF1Q3B7T1 1238 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 PTRHD1Q6GMV3 140 aaKnown RBP13.83□□□□□ -0.2
SCN8A-202ENST00000355133 HS6ST3Q8IZP7 471 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 SH2D3CQ8N5H7 860 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
SCN8A-202ENST00000355133 ALDH1A3P47895 512 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 GLRA4Q5JXX5 417 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 ABHD8Q96I13 439 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 OSBPL8Q9BZF1 889 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 ABI2Q9NYB9 513 aaPredicted RBP13.83□□□□□ -0.2
SCN8A-202ENST00000355133 ADGRA2Q96PE1 1338 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 RPA1P27694 616 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 HARS2P49590 506 aaKnown RBP13.83□□□□□ -0.2
SCN8A-202ENST00000355133 NBPF9Q3BBW0 867 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 SHCBP1Q8NEM2 672 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 KLF6Q99612 283 aaPredicted RBP13.83□□□□□ -0.2
SCN8A-202ENST00000355133 APOL5Q9BWW9 433 aa13.83□□□□□ -0.2
SCN8A-202ENST00000355133 CHUKO15111 745 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 AGTP01019 485 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 DDX5P17844 614 aaKnown RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 PTK7Q13308 1070 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 PDK1Q15118 436 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 TRADDQ15628 312 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ANKRD13AQ8IZ07 590 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 OR2W6PQ8NHA6 318 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 PSMC3IPQ9P2W1 217 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 C17orf102A2RUQ5 167 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 PJA2O43164 708 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 CST8O60676 142 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ARIH2O95376 493 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ORC1Q13415 861 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 LAMC2Q13753 1193 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 UGP2Q16851 508 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 RBM12Q9NTZ6 932 aaKnown RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 FBXO28Q9NVF7 368 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 C1orf167Q5SNV9 1468 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ABCE1P61221 599 aaKnown RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ZRANB3Q5FWF4 1079 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 GPR63Q9BZJ6 419 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ITIH6Q6UXX5 1313 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 SLC26A4O43511 780 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 MYL2P10916 166 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ENO3P13929 434 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 THPOP40225 353 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ATXN3P54252 364 aaPredicted RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 B4GALNT2Q8NHY0 566 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 HPS4Q9NQG7 708 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 EHD2Q9NZN4 543 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 SMG5Q9UPR3 1016 aaKnown RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 MAFGO15525 162 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 WASHC5Q12768 1159 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 SGO1Q5FBB7 561 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 RARS2Q5T160 578 aaKnown RBP13.82□□□□□ -0.2
SCN8A-202ENST00000355133 RASGRP2Q7LDG7 609 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 ZFYVE19Q96K21 471 aa13.82□□□□□ -0.2
SCN8A-202ENST00000355133 TRPM1Q7Z4N2 1603 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 GPR75-ASB3A0A0A6YYF3 556 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 RRN3P2A6NIE6 340 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 TAF6P49848 677 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms