RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 GUF1Q8N442 669 aaKnown RBP2.56□□□□□ -2
VPS54-202ENST00000354504 FAM181AQ8N9Y4 354 aa2.56□□□□□ -2
VPS54-202ENST00000354504 KCT2Q8NC54 265 aa2.56□□□□□ -2
VPS54-202ENST00000354504 THAP3Q8WTV1 239 aaPredicted RBP2.56□□□□□ -2
VPS54-202ENST00000354504 CD101Q93033 1021 aa2.56□□□□□ -2
VPS54-202ENST00000354504 MRGPRX3Q96LB0 322 aa2.56□□□□□ -2
VPS54-202ENST00000354504 CTAGE1Q96RT6 745 aa2.56□□□□□ -2
VPS54-202ENST00000354504 REEP2Q9BRK0 252 aa2.56□□□□□ -2
VPS54-202ENST00000354504 AKTIPQ9H8T0 292 aa2.56□□□□□ -2
VPS54-202ENST00000354504 XPNPEP1Q9NQW7 623 aa2.56□□□□□ -2
VPS54-202ENST00000354504 RAD18Q9NS91 495 aa2.56□□□□□ -2
VPS54-202ENST00000354504 EBF1Q9UH73 591 aa2.56□□□□□ -2
VPS54-202ENST00000354504 CTNND2Q9UQB3 1225 aa2.56□□□□□ -2
VPS54-202ENST00000354504 NEU2Q9Y3R4 380 aa2.56□□□□□ -2
VPS54-202ENST00000354504 R3HCC1Q9Y3T6 440 aaKnown RBP2.56□□□□□ -2
VPS54-202ENST00000354504 NME7Q9Y5B8 376 aa2.56□□□□□ -2
VPS54-202ENST00000354504 CCDC163A0A0D9SF12 145 aa2.55□□□□□ -2
VPS54-202ENST00000354504 HMX2A2RU54 273 aa2.55□□□□□ -2
VPS54-202ENST00000354504 SMTNL1A8MU46 457 aa2.55□□□□□ -2
VPS54-202ENST00000354504 TISP43B9A030 160 aa2.55□□□□□ -2
VPS54-202ENST00000354504 DYNC1I1O14576 645 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CCNT1O60563 726 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 RFPL3O75679 317 aa2.55□□□□□ -2
VPS54-202ENST00000354504 AKAP3O75969 853 aa2.55□□□□□ -2
VPS54-202ENST00000354504 SKILP12757 684 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CHRNB2P17787 502 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PROZP22891 400 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CCNE1P24864 410 aa2.55□□□□□ -2
VPS54-202ENST00000354504 HOXC8P31273 242 aa2.55□□□□□ -2
VPS54-202ENST00000354504 TRDNQ13061 729 aa2.55□□□□□ -2
VPS54-202ENST00000354504 KIR3DS1Q14943 382 aa2.55□□□□□ -2
VPS54-202ENST00000354504 TMEM132BQ14DG7 1078 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PGM5Q15124 567 aa2.55□□□□□ -2
VPS54-202ENST00000354504 NONOQ15233 471 aaKnown RBP eCLIP2.55□□□□□ -2
VPS54-202ENST00000354504 UBAP2Q5T6F2 1119 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 PKN3Q6P5Z2 889 aa2.55□□□□□ -2
VPS54-202ENST00000354504 FBXO38Q6PIJ6 1188 aa2.55□□□□□ -2
VPS54-202ENST00000354504 ANO5Q75V66 913 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PALB2Q86YC2 1186 aa2.55□□□□□ -2
VPS54-202ENST00000354504 C12orf56Q8IXR9 622 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CNNM3Q8NE01 707 aa2.55□□□□□ -2
VPS54-202ENST00000354504 ST13P5Q8NFI4 369 aaPredicted RBP2.55□□□□□ -2
VPS54-202ENST00000354504 BICD2Q8TD16 824 aa2.55□□□□□ -2
VPS54-202ENST00000354504 NELFBQ8WX92 580 aa2.55□□□□□ -2
VPS54-202ENST00000354504 SLC35C1Q96A29 364 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CCDC17Q96LX7 622 aa2.55□□□□□ -2
VPS54-202ENST00000354504 FEZ1Q99689 392 aa2.55□□□□□ -2
VPS54-202ENST00000354504 NTPCRQ9BSD7 190 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 MKRN2Q9H000 416 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 EPC1Q9H2F5 836 aa2.55□□□□□ -2
VPS54-202ENST00000354504 AGO4Q9HCK5 861 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 GFOD1Q9NXC2 390 aa2.55□□□□□ -2
VPS54-202ENST00000354504 AIPL1Q9NZN9 384 aa2.55□□□□□ -2
VPS54-202ENST00000354504 H2AFY2Q9P0M6 372 aaPredicted RBP2.55□□□□□ -2
VPS54-202ENST00000354504 PPARGC1AQ9UBK2 798 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 CGGBP1Q9UFW8 167 aaPredicted RBP2.55□□□□□ -2
VPS54-202ENST00000354504 NFASCO94856 1347 aa2.55□□□□□ -2
VPS54-202ENST00000354504 LRRK1Q38SD2 2015 aa2.55□□□□□ -2
VPS54-202ENST00000354504 FREM2Q5SZK8 3169 aa2.55□□□□□ -2
VPS54-202ENST00000354504 IGKV6-21A0A0C4DH24 114 aa2.55□□□□□ -2
VPS54-202ENST00000354504 ZNF891A8MT65 544 aaPredicted RBP2.55□□□□□ -2
VPS54-202ENST00000354504 KCNJ18B7U540 433 aa2.55□□□□□ -2
VPS54-202ENST00000354504 F8W031 263 aaPredicted RBP2.55□□□□□ -2
VPS54-202ENST00000354504 VWA5AO00534 786 aa2.55□□□□□ -2
VPS54-202ENST00000354504 NPHP1O15259 732 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PRPF6O94906 941 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 BMP15O95972 392 aa2.55□□□□□ -2
VPS54-202ENST00000354504 LDHCP07864 332 aa2.55□□□□□ -2
VPS54-202ENST00000354504 IQCF3P0C7M6 154 aa2.55□□□□□ -2
VPS54-202ENST00000354504 GLB1P16278 677 aa2.55□□□□□ -2
VPS54-202ENST00000354504 VCAM1P19320 739 aa2.55□□□□□ -2
VPS54-202ENST00000354504 MUTP22033 750 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CALML3P27482 149 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PRKCIP41743 596 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CASP4P49662 377 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PPATQ06203 517 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PTP4A2Q12974 167 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PICALMQ13492 652 aa2.55□□□□□ -2
VPS54-202ENST00000354504 KCNJ12Q14500 433 aa2.55□□□□□ -2
VPS54-202ENST00000354504 PLEKHG6Q3KR16 790 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CERKLQ49MI3 558 aaPredicted RBP2.55□□□□□ -2
VPS54-202ENST00000354504 CBWD6Q4V339 395 aa2.55□□□□□ -2
VPS54-202ENST00000354504 EPC2Q52LR7 807 aa2.55□□□□□ -2
VPS54-202ENST00000354504 ANKRD39Q53RE8 183 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CBWD3Q5JTY5 395 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CBWD5Q5RIA9 395 aa2.55□□□□□ -2
VPS54-202ENST00000354504 FAM83BQ5T0W9 1011 aa2.55□□□□□ -2
VPS54-202ENST00000354504 TREML2Q5T2D2 321 aa2.55□□□□□ -2
VPS54-202ENST00000354504 SYDE2Q5VT97 1194 aa2.55□□□□□ -2
VPS54-202ENST00000354504 FAM117BQ6P1L5 589 aa2.55□□□□□ -2
VPS54-202ENST00000354504 LETMD1Q6P1Q0 360 aa2.55□□□□□ -2
VPS54-202ENST00000354504 EEPD1Q7L9B9 569 aa2.55□□□□□ -2
VPS54-202ENST00000354504 CABP7Q86V35 215 aa2.55□□□□□ -2
VPS54-202ENST00000354504 TTLL6Q8N841 843 aa2.55□□□□□ -2
VPS54-202ENST00000354504 ACRBPQ8NEB7 543 aa2.55□□□□□ -2
VPS54-202ENST00000354504 GIMAP7Q8NHV1 300 aa2.55□□□□□ -2
VPS54-202ENST00000354504 LNX1Q8TBB1 728 aaPredicted RBP2.55□□□□□ -2
VPS54-202ENST00000354504 CYB5D2Q8WUJ1 264 aa2.55□□□□□ -2
VPS54-202ENST00000354504 LARP4BQ92615 738 aaKnown RBP2.55□□□□□ -2
VPS54-202ENST00000354504 P2RX5Q93086 422 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms